| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_10500 |
|---|
| Symbol | |
|---|
| ID | 4382140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 903617 |
|---|
| End bp | 905044 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639323400 |
|---|
| Product | cbb3-type cytochrome c oxidase subunit I |
|---|
| Protein accession | YP_788989 |
|---|
| Protein GI | 116052167 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
|---|
| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAG CAACGACGGA ACCTGCCTAC AACTACAAGG TGGTTCGCCA GTTCGCCATC
ATGACCGTGG TATGGGGCGT GATCGGCATG GGGTTGGGCG TACTGATCGC CTCGCAACTG
GTCTGGCCCC AGATGAACTT CGACCTGCCC TGGACCAGCT TCGGCCGCCT GCGGCCGCTG
CATACCAACC TGGTGATCTT CGCCTTCGGC GGCTGCGCGC TGTTCGCCAC CAGCTACTAC
ACGGTGCAGC GTACCTGCCA GGTGCGACTG TTCTCCGACA CCCTGGCCGC CTTCACCTTC
TGGGGCTGGC AGGCGGTGGC GGTGATCCTG CTGGTCAGCC TGCCGCTGGG CAACACCACC
ACCAAGGAAT ACGCCGAGAT CGAGTTCACC GGCGCGATCT GGCTGGCGAT CGTCTGGGTC
GCCTACGCGG TGGTGTTCTT CGGCACCCTG ATCAAGCGCA AGGTCAAGCA CATCTATGTC
GGCAACTGGT TCTTCGGCTC GTTCATCCTG ACCACCGCGA TGCTGCACAT CGTCAACCAC
ATGTCGCTGC CGGTGAGCTG GTTCAAGTCC TACTCGATGT ACTCCGGCGC CACCGATGCC
ATGGTCCAGT GGTGGTACGG GCACAACGCC GTAGGCTTCT TCCTGACCAC CGGCTTCCTC
GGCATGATGT ACTACTTCGT GCCCAAGCAA GCCGGGCGCC CGGTCTACTC CTACCGGCTG
TCCATCGTCC ACTTCTGGGC GCTGATCACC CTGTACATCT GGGCCGGCCC GCACCACCTG
CACTACACCG CGCTGCCGGA CTGGGCGCAG TCGCTGGGCA TGGTGATGTC GCTGATCCTC
CTGGCGCCGA GCTGGGGCGG CATGATCAAC GGCATGATGA CCCTCTCCGG GGCCTGGCAT
AAGCTGCGCG ACGACCCGAT CCTGCGCTTC CTGGTGGTGT CCCTGGCGTT CTACGGCATG
TCCACCTTCG AAGGCCCGAT GATGGCGATC AAGACCGTCA ACGCCCTCTC CCACTACACC
GACTGGACCA TCGGCCACGT CCACGCCGGC GCCCTCGGCT GGGTCGCGAT GATCACCATC
GGCTCGCTCT ACCACCTGAT TCCCAAGGTC TACGGGGTCG AGAAGATGCA CAGCGTCGGC
CTGATCAATG CGCACTTCTG GCTGGCCACC ATCGGCACCG TGCTGTACAT CGCCTCGCTG
TGGGTCAACG GCATTACCCA GGGCCTGATG TGGCGCGCGG TCAACGAGGA CGGCACGCTG
ACCTACTCCT TCGTCGAGTC GCTGGTGGCC AGCCATCCGG GCTTCATCGT GCGCCTGGTC
GGTGGCGGGT TCTTCCTCAC CGGCATGCTG CTGATGAGCT ACAACACCTG GCGCACGGTA
CGCCAGGCGC GCCCGGAAGG AATCCTCGCG GCGGCCCGCA TGGCCTGA
|
|---|
| Protein sequence | MNKATTEPAY NYKVVRQFAI MTVVWGVIGM GLGVLIASQL VWPQMNFDLP WTSFGRLRPL
HTNLVIFAFG GCALFATSYY TVQRTCQVRL FSDTLAAFTF WGWQAVAVIL LVSLPLGNTT
TKEYAEIEFT GAIWLAIVWV AYAVVFFGTL IKRKVKHIYV GNWFFGSFIL TTAMLHIVNH
MSLPVSWFKS YSMYSGATDA MVQWWYGHNA VGFFLTTGFL GMMYYFVPKQ AGRPVYSYRL
SIVHFWALIT LYIWAGPHHL HYTALPDWAQ SLGMVMSLIL LAPSWGGMIN GMMTLSGAWH
KLRDDPILRF LVVSLAFYGM STFEGPMMAI KTVNALSHYT DWTIGHVHAG ALGWVAMITI
GSLYHLIPKV YGVEKMHSVG LINAHFWLAT IGTVLYIASL WVNGITQGLM WRAVNEDGTL
TYSFVESLVA SHPGFIVRLV GGGFFLTGML LMSYNTWRTV RQARPEGILA AARMA
|
|---|
| |