| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_10480 |
|---|
| Symbol | |
|---|
| ID | 4382142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 902853 |
|---|
| End bp | 903275 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639323398 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_788987 |
|---|
| Protein GI | 116052169 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02337] homoprotocatechuate degradation operon regulator, HpaR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACGC CAAGACCCTC CCTGACCCTG ACCCTGTTGC AGGCTCGCGA AGCCGCGATG
AGTTTCTTCC GTCCCTCCCT CAACCAGCAC GGCCTCACCG AGCAGCAGTG GCGGGTGATC
CGCATCCTGC GCCAGCAGGG CGAGATGGAG AGCTACCAGT TGGCCAACCA GGCCTGCATC
CTGCGCCCGA GCATGACCGG CGTGCTGGCG CGCCTGGAGC GCGACGGCAT CGTCCGGCGC
TGGAAGGCGC CAAAGGACCA GCGGCGGGTC TACGTGAACC TGACGGAGAA GGGCCAGCAG
TGCTTCGTCT CCATGAGCGG CGACATGGAG AAGAACTACC AGCGCATCCA GGAGCGGTTC
GGCGAGGAAA AGCTCGCGCA GTTGCTGGAA CTGCTCAACG AGCTGAAGAA GATAAAGCCC
TGA
|
|---|
| Protein sequence | MSTPRPSLTL TLLQAREAAM SFFRPSLNQH GLTEQQWRVI RILRQQGEME SYQLANQACI
LRPSMTGVLA RLERDGIVRR WKAPKDQRRV YVNLTEKGQQ CFVSMSGDME KNYQRIQERF
GEEKLAQLLE LLNELKKIKP
|
|---|
| |