Gene PA14_10250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_10250 
SymbolacoB 
ID4382160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp882259 
End bp883278 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content68% 
IMG OID639323380 
Productacetoin catabolism protein AcoB 
Protein accessionYP_788969 
Protein GI116052187 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGAA AGATCAGCTA CCAGCAGGCC ATCAACGAGG CGCTGGCCCA GGAAATGCGC 
CGCGACCCGA GCGTCTTCAT CATGGGCGAA GACAATGCCG GCGGCGCCGG CGCGCCCGGC
GAGGACGACG CCTGGGGCGG CGTGCTGGGG GTCACCAAGG GCCTCTACCA CCAGTTCCCC
GGCCGCGTGC TGGATACCCC GTTGTCAGAG ATCGGCTATG TCGGCGCCGC GGTCGGCGCC
GCCACCCGCG GCATGCGCCC GGTGTGCGAA CTGATGTTCG TCGACTTCGC CGGTTGCTGC
CTGGACCAGA TCCTCAACCA GGCCGCCAAG TTCCGCTACA TGTTCGGCGG CAAGGCGGTC
ACCCCGCTGG TGATCCGTAC CATGGTCGGC GCCGGCCTGC GCGCCGCCGC CCAACATTCG
CAGATGCTCA CTTCGCTATG GACCCACATC CCCGGCCTCA AGGTGGTCTG CCCGTCGTCG
CCCTACGACG CCAAGGGCCT GCTGGTCCAG GCGATCCGCG ACAACGACCC GGTGATCTTC
TGCGAGCACA AGCTGCTCTA TTCGATGCAG GGCGAGGTAC CCGAGGAGCT GTACAGCGTA
CCCTTCGGCG AGGCGAACTT CCTCCGCGAC GGCGACGACG TCACCCTGGT GACCTACGGC
CGCATGGTCC ACCTGGCGCT GGACGCCGCC GCCAGCCTGG CGCGCCAGGG CATCTCCTGC
GAAGTACTGG ACCTGCGCAG CACCAGCCCG CTGGACGAGG ACAGCATTCT CGAAAGCGTG
GAAAAGACCG GCCGCCTGGT GGTGGTCGAC GAAGCCAACC CACGCTGCTC GATGGCCACC
GACATCGCCG CGCTGGTCGC CGAACGGGCC TTCTCCGCGC TGCACGCGCC GATCCGCCGG
GTCACCGCGC CCCATACGCC GGTGCCTTTC TCCGACGCCC TGGAAGACCT CTACATCCCC
GACGCGGCGA AGATCGAGGC AGCCGTGCGC CAGGCCCTGG AAGGGAGGGA CGCGGCATGA
 
Protein sequence
MARKISYQQA INEALAQEMR RDPSVFIMGE DNAGGAGAPG EDDAWGGVLG VTKGLYHQFP 
GRVLDTPLSE IGYVGAAVGA ATRGMRPVCE LMFVDFAGCC LDQILNQAAK FRYMFGGKAV
TPLVIRTMVG AGLRAAAQHS QMLTSLWTHI PGLKVVCPSS PYDAKGLLVQ AIRDNDPVIF
CEHKLLYSMQ GEVPEELYSV PFGEANFLRD GDDVTLVTYG RMVHLALDAA ASLARQGISC
EVLDLRSTSP LDEDSILESV EKTGRLVVVD EANPRCSMAT DIAALVAERA FSALHAPIRR
VTAPHTPVPF SDALEDLYIP DAAKIEAAVR QALEGRDAA