Gene PA14_10200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_10200 
Symbol 
ID4382165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp875397 
End bp877481 
Gene Length2085 bp 
Protein Length694 aa 
Translation table11 
GC content66% 
IMG OID639323375 
Productputative TonB-dependent receptor protein 
Protein accessionYP_788964 
Protein GI116052192 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.965249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACGCCC GCACGCACCG CACGCTCAAC CGGGGAATCG GCGTCGTCAC GCTGTCCACC 
CTGCTCGCCT CGCCATCGGC ACTGGCCCGG GAAAACCCGC CCGCCGAGGA CGAACCCGCC
GCCCTCGAGG CGCTGGTCGT GACCGGCGAG AAACGTGAAC GCTCGCTGAA GGACACGGCG
TCCTCGGTAT CGCTCACCAG CGCCCGCGAC ATCGACCGCA AGCAGACCGG CAACGCCTCG
GTCGCCGAGG TGATCAATGG CAGTCCCAAC GTGGTCTACA CCGACTCGGT GGGCGCGCCG
ATCATCCGCG GCCAGGACAC CCAGGGCCCG AACAACGGGC AGAACGTGTT CTGGGGTGGC
ACAGTGCCGC GGGCGACGAT CAACCTCGAT GGCCACTACC TGAACTACAA CGAGATGTTC
TTCGGCGCGA CCTCGGTCTG GGACGTCGAC AGCATCGAGG TGTTCCGCGG CCCGCAGACC
ACCTCCCAGG GCGCCAACGC CATCGCCGGG GCGATCATCG TCAACACCAA GGACCCGACC
TTCAGCCCCG AGGCTGCCTA CCAGGCGGAG ATCGGCAGCT ACCATTCGCG GCGCAGCTCG
ATCGCAGTGT CCGGCCCGCT GGCGCAGGAC TTCGCCGGGC GCCTGGCGGT GGACTACGCG
GGCCGCGACA CCTTCATCGA CTACGACAAC CCGAAGTTCC AGGACAGCGG CACCGACCAG
GACTTCCGCG CCCTCAACGC GCGCGCCAAG CTGCTCTGGC TGCCCAGCGG AATTCCGGGC
CTGGAGAGCA AGTTCACCTT CTCCCACAAC GACAGCAACC GCCCGACCCA GGAAGCGGCG
ACCCGCCCGT TCGACAAGCT CGACCATCGC TCGACCACCA TGCCCAGCTG GGAGCAGGAC
ACCAACACCA GCATCCTCGA CGTCGCCTAT GACCTCGACA ATGGCATCCG CCTGTTCAAC
CAGGCGCAGT ACTCGCTGTC CTCGGTGCAC CGCACCACCG GCGCGGGCGG CGAGGGCGAC
GCCGACATCC GCCAGAAGAA CGCCTCCAAC GAATCGCGGA TCAGCTTCGG CGAGCAGGAG
GACCGGATCA GCGGCATGGG CGGGGTCTAC TACGCCCGCA CCCGCACCGA CGAGACACTG
CACCTGCGCG GGCTGTCGGC CTTCGACGAC ACGAAGAAGA ACCTCGGTGT GTTCGGCGAG
CTGAACTACC GCCTGAGCGA CCGCTGGACC CTGACCACCG GCCTGCGCTA CCAGGAGGAT
CGCATCGAGC GCAGCGGCAA CTCGGTGCTG GCGCCGCGTC CGCTGGACTA CCAGAAGACC
TTCTCGGCCT TCCTGCCGAA AGTCTCCCTG GCCTTCGCCG CAACCCCGGA CTGGACCGTC
GGCGGCCTGG TCAGCCGCGG CTACAACCCC GGCGGCGTGT CGCTCAACCT GACTACCCGC
AACTGGGCCT ACTTCAAGGA AGAAACCATC TGGAACTACG AACTGTTCAC CCGCGCCAGC
CTGCTCGACG GCCGCCTGCT GCTGAACGGC AACCTGTTCT TCATGGATTT CAAGGACGCC
CAGTACAACA TCCCGGTGGT GGTTTCGCCG GGGGTGGCGC AGTCGTACAC CATCAACGCC
GAGAAGGCCC ACGCCTACGG CATGGAGCTG GACCTCGACT ACCGCCTACG CGACGACCTG
CGGCTGAAGG CCAGCGCCGG CGTGCTACGC ACCCGGATCG ACGAGATGTC CGGCAATACC
GGCTACGAGC ACAACGAGTT CGCCCGCTCG CCGGGCTATA CCCTCAGCTT CGGACCGAGC
TGGGACGTCA CCGAGCGCCT CAACCTGAAC GCCCAGGTGC GCTACCTGGA CGGCTACTAC
TCGGACACCG CCAACACCAA GGCCTACTCG ATCAAGGCCT ACACCCTCAC CGACGCCCGC
GCCAGCTACC GCTTCAACGA CCAGGTGCAG CTCTATGGCT ACGTGAAGAA CGTGTTCGAC
GACCGTTCGC CCACCTACAT GCAGGAAAAC CGGGGGATCG GTGGCATCGA GGCGAGCATG
ACGCAGCCGC GGACCCTCGG CATCGGCATC AAGGGCACCT TCTAG
 
Protein sequence
MNARTHRTLN RGIGVVTLST LLASPSALAR ENPPAEDEPA ALEALVVTGE KRERSLKDTA 
SSVSLTSARD IDRKQTGNAS VAEVINGSPN VVYTDSVGAP IIRGQDTQGP NNGQNVFWGG
TVPRATINLD GHYLNYNEMF FGATSVWDVD SIEVFRGPQT TSQGANAIAG AIIVNTKDPT
FSPEAAYQAE IGSYHSRRSS IAVSGPLAQD FAGRLAVDYA GRDTFIDYDN PKFQDSGTDQ
DFRALNARAK LLWLPSGIPG LESKFTFSHN DSNRPTQEAA TRPFDKLDHR STTMPSWEQD
TNTSILDVAY DLDNGIRLFN QAQYSLSSVH RTTGAGGEGD ADIRQKNASN ESRISFGEQE
DRISGMGGVY YARTRTDETL HLRGLSAFDD TKKNLGVFGE LNYRLSDRWT LTTGLRYQED
RIERSGNSVL APRPLDYQKT FSAFLPKVSL AFAATPDWTV GGLVSRGYNP GGVSLNLTTR
NWAYFKEETI WNYELFTRAS LLDGRLLLNG NLFFMDFKDA QYNIPVVVSP GVAQSYTINA
EKAHAYGMEL DLDYRLRDDL RLKASAGVLR TRIDEMSGNT GYEHNEFARS PGYTLSFGPS
WDVTERLNLN AQVRYLDGYY SDTANTKAYS IKAYTLTDAR ASYRFNDQVQ LYGYVKNVFD
DRSPTYMQEN RGIGGIEASM TQPRTLGIGI KGTF