Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_10200 |
Symbol | |
ID | 4382165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 875397 |
End bp | 877481 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639323375 |
Product | putative TonB-dependent receptor protein |
Protein accession | YP_788964 |
Protein GI | 116052192 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.965249 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACGCCC GCACGCACCG CACGCTCAAC CGGGGAATCG GCGTCGTCAC GCTGTCCACC CTGCTCGCCT CGCCATCGGC ACTGGCCCGG GAAAACCCGC CCGCCGAGGA CGAACCCGCC GCCCTCGAGG CGCTGGTCGT GACCGGCGAG AAACGTGAAC GCTCGCTGAA GGACACGGCG TCCTCGGTAT CGCTCACCAG CGCCCGCGAC ATCGACCGCA AGCAGACCGG CAACGCCTCG GTCGCCGAGG TGATCAATGG CAGTCCCAAC GTGGTCTACA CCGACTCGGT GGGCGCGCCG ATCATCCGCG GCCAGGACAC CCAGGGCCCG AACAACGGGC AGAACGTGTT CTGGGGTGGC ACAGTGCCGC GGGCGACGAT CAACCTCGAT GGCCACTACC TGAACTACAA CGAGATGTTC TTCGGCGCGA CCTCGGTCTG GGACGTCGAC AGCATCGAGG TGTTCCGCGG CCCGCAGACC ACCTCCCAGG GCGCCAACGC CATCGCCGGG GCGATCATCG TCAACACCAA GGACCCGACC TTCAGCCCCG AGGCTGCCTA CCAGGCGGAG ATCGGCAGCT ACCATTCGCG GCGCAGCTCG ATCGCAGTGT CCGGCCCGCT GGCGCAGGAC TTCGCCGGGC GCCTGGCGGT GGACTACGCG GGCCGCGACA CCTTCATCGA CTACGACAAC CCGAAGTTCC AGGACAGCGG CACCGACCAG GACTTCCGCG CCCTCAACGC GCGCGCCAAG CTGCTCTGGC TGCCCAGCGG AATTCCGGGC CTGGAGAGCA AGTTCACCTT CTCCCACAAC GACAGCAACC GCCCGACCCA GGAAGCGGCG ACCCGCCCGT TCGACAAGCT CGACCATCGC TCGACCACCA TGCCCAGCTG GGAGCAGGAC ACCAACACCA GCATCCTCGA CGTCGCCTAT GACCTCGACA ATGGCATCCG CCTGTTCAAC CAGGCGCAGT ACTCGCTGTC CTCGGTGCAC CGCACCACCG GCGCGGGCGG CGAGGGCGAC GCCGACATCC GCCAGAAGAA CGCCTCCAAC GAATCGCGGA TCAGCTTCGG CGAGCAGGAG GACCGGATCA GCGGCATGGG CGGGGTCTAC TACGCCCGCA CCCGCACCGA CGAGACACTG CACCTGCGCG GGCTGTCGGC CTTCGACGAC ACGAAGAAGA ACCTCGGTGT GTTCGGCGAG CTGAACTACC GCCTGAGCGA CCGCTGGACC CTGACCACCG GCCTGCGCTA CCAGGAGGAT CGCATCGAGC GCAGCGGCAA CTCGGTGCTG GCGCCGCGTC CGCTGGACTA CCAGAAGACC TTCTCGGCCT TCCTGCCGAA AGTCTCCCTG GCCTTCGCCG CAACCCCGGA CTGGACCGTC GGCGGCCTGG TCAGCCGCGG CTACAACCCC GGCGGCGTGT CGCTCAACCT GACTACCCGC AACTGGGCCT ACTTCAAGGA AGAAACCATC TGGAACTACG AACTGTTCAC CCGCGCCAGC CTGCTCGACG GCCGCCTGCT GCTGAACGGC AACCTGTTCT TCATGGATTT CAAGGACGCC CAGTACAACA TCCCGGTGGT GGTTTCGCCG GGGGTGGCGC AGTCGTACAC CATCAACGCC GAGAAGGCCC ACGCCTACGG CATGGAGCTG GACCTCGACT ACCGCCTACG CGACGACCTG CGGCTGAAGG CCAGCGCCGG CGTGCTACGC ACCCGGATCG ACGAGATGTC CGGCAATACC GGCTACGAGC ACAACGAGTT CGCCCGCTCG CCGGGCTATA CCCTCAGCTT CGGACCGAGC TGGGACGTCA CCGAGCGCCT CAACCTGAAC GCCCAGGTGC GCTACCTGGA CGGCTACTAC TCGGACACCG CCAACACCAA GGCCTACTCG ATCAAGGCCT ACACCCTCAC CGACGCCCGC GCCAGCTACC GCTTCAACGA CCAGGTGCAG CTCTATGGCT ACGTGAAGAA CGTGTTCGAC GACCGTTCGC CCACCTACAT GCAGGAAAAC CGGGGGATCG GTGGCATCGA GGCGAGCATG ACGCAGCCGC GGACCCTCGG CATCGGCATC AAGGGCACCT TCTAG
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Protein sequence | MNARTHRTLN RGIGVVTLST LLASPSALAR ENPPAEDEPA ALEALVVTGE KRERSLKDTA SSVSLTSARD IDRKQTGNAS VAEVINGSPN VVYTDSVGAP IIRGQDTQGP NNGQNVFWGG TVPRATINLD GHYLNYNEMF FGATSVWDVD SIEVFRGPQT TSQGANAIAG AIIVNTKDPT FSPEAAYQAE IGSYHSRRSS IAVSGPLAQD FAGRLAVDYA GRDTFIDYDN PKFQDSGTDQ DFRALNARAK LLWLPSGIPG LESKFTFSHN DSNRPTQEAA TRPFDKLDHR STTMPSWEQD TNTSILDVAY DLDNGIRLFN QAQYSLSSVH RTTGAGGEGD ADIRQKNASN ESRISFGEQE DRISGMGGVY YARTRTDETL HLRGLSAFDD TKKNLGVFGE LNYRLSDRWT LTTGLRYQED RIERSGNSVL APRPLDYQKT FSAFLPKVSL AFAATPDWTV GGLVSRGYNP GGVSLNLTTR NWAYFKEETI WNYELFTRAS LLDGRLLLNG NLFFMDFKDA QYNIPVVVSP GVAQSYTINA EKAHAYGMEL DLDYRLRDDL RLKASAGVLR TRIDEMSGNT GYEHNEFARS PGYTLSFGPS WDVTERLNLN AQVRYLDGYY SDTANTKAYS IKAYTLTDAR ASYRFNDQVQ LYGYVKNVFD DRSPTYMQEN RGIGGIEASM TQPRTLGIGI KGTF
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