Gene PA14_10080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_10080 
Symbol 
ID4382175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp865944 
End bp866321 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content65% 
IMG OID639323365 
Producthypothetical protein 
Protein accessionYP_788954 
Protein GI116052202 
COG category[S] Function unknown 
COG ID[COG4319] Ketosteroid isomerase homolog 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000466848 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.805949 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCC AGTCCATCCT GCAATCCTAC GAGACCGCCC TCAACGCCAA CGACATCGAC 
GCCATCCTCG ATCTCTACGG CGAAGCGCCG GTATTCATGC CGCAGCACGC CCCGGCCCTG
GTCGGCCGCG AGGCAGTCCG CGCCGGCTAC CAGCAAGTGT TCGCCAGTAT CAAGTTGCAG
ATCCGCTTCG ACATCCACGA GGTCGAGGTC ATCGGCGACT GGGCCTGGGC CCGCACCAGT
TCGGCCGGCC GCACCCGCCT CCTGGCCGAA GACGTGGAAA TCGCGGAGGG CAACAACGAG
CTGTTCGTGT TCCGGCGCGA ACACGGCCAC TGGAAGATCC ACCGCTATCT CTTCGCCACC
AACCAACCGC GCGCCTGA
 
Protein sequence
MTIQSILQSY ETALNANDID AILDLYGEAP VFMPQHAPAL VGREAVRAGY QQVFASIKLQ 
IRFDIHEVEV IGDWAWARTS SAGRTRLLAE DVEIAEGNNE LFVFRREHGH WKIHRYLFAT
NQPRA