Gene PA14_09960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_09960 
Symbol 
ID4382184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp855942 
End bp856370 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content66% 
IMG OID639323356 
Producthypothetical protein 
Protein accessionYP_788945 
Protein GI116052211 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAACG ACACCCGCCT CTCGCGCATG CTCCATGTGC TGATCCATAT GGCCCGCCAC 
GAAGGGCCGG CGACTTCCGA AGCCATCGCG CAGATGCTCG GCACCAACCC GGTGGTGGTG
CGACGGACCA TGGCGCTGCT GAAGAACGAA GGCTACGTGA GTTCGGAGAA GGGCCATCGC
GGCGGTTGGC GGCTGGCCAA GCCGTTGGCG GACATCACCT TGCTGGATAT CCACCAGGCG
CTGGGAGCGT CCTCGATCTT CGCCATCGGC CTGTCTACCG ATCATCCGGA ATGCCTGGTC
GAGCAGGCGG TCAACGAAGC GCTCGGCGAG GCGTTCGAGG CGGCGCAGGC GTTGCTCCTG
GAGCGCCTGG GGAGCGTCAC GCTGGAGCAG TTGGCGAGCG AGTTCGAGCG CCGCTATCGG
CCCTGCTGA
 
Protein sequence
MRNDTRLSRM LHVLIHMARH EGPATSEAIA QMLGTNPVVV RRTMALLKNE GYVSSEKGHR 
GGWRLAKPLA DITLLDIHQA LGASSIFAIG LSTDHPECLV EQAVNEALGE AFEAAQALLL
ERLGSVTLEQ LASEFERRYR PC