Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_09870 |
Symbol | |
ID | 4382193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 848003 |
End bp | 848746 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639323347 |
Product | hypothetical protein |
Protein accession | YP_788936 |
Protein GI | 116052220 |
COG category | [R] General function prediction only |
COG ID | [COG4976] Predicted methyltransferase (contains TPR repeat) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.261813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCCA CTGCGCTGTA CACCGACCTG TCCCACTATT ACGACCTGAT GTGCGCCGAC ATCGACTACC AGGCGCAGAG CCACTGCGTG CGTCGCCTGC ACCAGTTGTT CGGCAACCAG GGCCGGCGGC ACCTGGACCT GGCCTGCGGT ACCGGCCCTC ACGTGAGGCA CTTCCTCGAT TTCGGCTATC GCAGCGCCGG CCTGGACATC AACCAGCCGA TGCTCGACCT CGCCCGACAG CGCTGCCCCG AAGCGCACTT CAGCCGGCAG GACATGGCCG GCTTCCAGGT GGACGAGCCG CTGGACCTGA TCACCTGTTT CCTCTATTCG ATCCACTACA ACGCAGGGCT GGAGCGCTTG CGCGCATGCC TGGCCAGCGT GCATGGCGCA CTGGCGGATG GCGGCGTGTT CTGTTTCAAC ACGGTGGACA AGGGGCAGAT CGACAATCGC TCGTTCGTCC GCCATTCCGT GGAGCATCGA GGCAGCCGCT TCACCTTCGG TTCCGGCTGG TACTACAGCG GCGAGGGCGA GCGCCAGGCG CTGCGCCTCG GTATCGAGAA AACCACGGAC GGAACGACCC AGACCTGGGA GGACGAACAC CCCATGGTCG CCCTCAGCTT CGCCGAGCTG CAGCACCTGT TGCAGACGCA TTTCGAGGTG CAGGTCTTCG AACACGACTA CGAACGGATC ACGCCCTGGG CCGGCAGCTC CGGGAATGCC CTGTTCGTCT GCGTGAAGCG CTAG
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Protein sequence | MSATALYTDL SHYYDLMCAD IDYQAQSHCV RRLHQLFGNQ GRRHLDLACG TGPHVRHFLD FGYRSAGLDI NQPMLDLARQ RCPEAHFSRQ DMAGFQVDEP LDLITCFLYS IHYNAGLERL RACLASVHGA LADGGVFCFN TVDKGQIDNR SFVRHSVEHR GSRFTFGSGW YYSGEGERQA LRLGIEKTTD GTTQTWEDEH PMVALSFAEL QHLLQTHFEV QVFEHDYERI TPWAGSSGNA LFVCVKR
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