Gene PA14_09870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_09870 
Symbol 
ID4382193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp848003 
End bp848746 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content65% 
IMG OID639323347 
Producthypothetical protein 
Protein accessionYP_788936 
Protein GI116052220 
COG category[R] General function prediction only 
COG ID[COG4976] Predicted methyltransferase (contains TPR repeat) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.261813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCA CTGCGCTGTA CACCGACCTG TCCCACTATT ACGACCTGAT GTGCGCCGAC 
ATCGACTACC AGGCGCAGAG CCACTGCGTG CGTCGCCTGC ACCAGTTGTT CGGCAACCAG
GGCCGGCGGC ACCTGGACCT GGCCTGCGGT ACCGGCCCTC ACGTGAGGCA CTTCCTCGAT
TTCGGCTATC GCAGCGCCGG CCTGGACATC AACCAGCCGA TGCTCGACCT CGCCCGACAG
CGCTGCCCCG AAGCGCACTT CAGCCGGCAG GACATGGCCG GCTTCCAGGT GGACGAGCCG
CTGGACCTGA TCACCTGTTT CCTCTATTCG ATCCACTACA ACGCAGGGCT GGAGCGCTTG
CGCGCATGCC TGGCCAGCGT GCATGGCGCA CTGGCGGATG GCGGCGTGTT CTGTTTCAAC
ACGGTGGACA AGGGGCAGAT CGACAATCGC TCGTTCGTCC GCCATTCCGT GGAGCATCGA
GGCAGCCGCT TCACCTTCGG TTCCGGCTGG TACTACAGCG GCGAGGGCGA GCGCCAGGCG
CTGCGCCTCG GTATCGAGAA AACCACGGAC GGAACGACCC AGACCTGGGA GGACGAACAC
CCCATGGTCG CCCTCAGCTT CGCCGAGCTG CAGCACCTGT TGCAGACGCA TTTCGAGGTG
CAGGTCTTCG AACACGACTA CGAACGGATC ACGCCCTGGG CCGGCAGCTC CGGGAATGCC
CTGTTCGTCT GCGTGAAGCG CTAG
 
Protein sequence
MSATALYTDL SHYYDLMCAD IDYQAQSHCV RRLHQLFGNQ GRRHLDLACG TGPHVRHFLD 
FGYRSAGLDI NQPMLDLARQ RCPEAHFSRQ DMAGFQVDEP LDLITCFLYS IHYNAGLERL
RACLASVHGA LADGGVFCFN TVDKGQIDNR SFVRHSVEHR GSRFTFGSGW YYSGEGERQA
LRLGIEKTTD GTTQTWEDEH PMVALSFAEL QHLLQTHFEV QVFEHDYERI TPWAGSSGNA
LFVCVKR