Gene PA14_09770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_09770 
Symbol 
ID4382199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp841579 
End bp842601 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content69% 
IMG OID639323341 
ProductAraC family transcriptional regulator 
Protein accessionYP_788930 
Protein GI116052226 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGAA GGCGTTTCAG CGCCGCCCTG CAAGGGCAGA ACCTCAGGTT CACCGGGGCC 
GGGGAGGGGG GCTCGGCACG GGCACGGGTG GGCTTCCTGC TGCTCGAACA CTTTTCCCTG
CCGGCCTTCA CCCAGGCGCT GGACACCCTG GTGACCGCCA ACCTGATCCG CAGCGAGTCC
TTCGCGGTGA GCAACTTCAG CCTGAGCGGC GAGCCGGTGA CCAGCGACCT CGGGTTGCTG
ATCTGCCCGG ACCTGGCGCT CGCCTCGGCG GCGCGGCAAG GACTCGACCT GCTGGTGGTC
TGCGGCGGTT TGCGCACGCC CCTGCGCTCG TCCGCCGCGC TGCGGGAAGC GTTGCAGGAC
GTGGCGTCGC GCGGCGTCGC CCTGGCCGGG CTGTGGAACG GTGCCTGGTT CCTCGGCGAC
GCCGGCCTGC TGGATGGCTA CCGCTGCTGC ATCCATCCCG AGCACCGCGC CGCCCTCGCC
GAGATCGCCC GCAACAGCCA GGTGACCAGC GACAGCTACA TGGTCGACCG CGACCGCCTG
ACCGCGGCCA GCCCCACCGG CGCCTTCAAC CTGGCGCTGG AGTGGATCGC CCGGCGCCAC
GGGCGCGACC TGGTGGAGGC GGTGGTGGAT ATCCTCGCCT TCGAGGAGTC GCGCTACCGA
CGGGTGCGCC CGGCCCTGCA CGAGAAGATG AGCGAGCCGC TGCGCGAAGT GATCAACCTG
ATGGCGGCGA ATATCGAGGA ACCGCTCAGC CAGGAGCAGC TCGCCCACTA CGTGGGGCGC
TCGCGGCGGC AGATCGAGCG GCTGTTCCAG CAGCAGCTCG GAACCACGCC GGTGCGCTAC
TACCTGGAGT TGCGGATCAC CGAGTGCCGG CGCCTGCTGC AACATTCCGA CCTGACCATG
CTGGAGGTCC TGGTCGCCTG CGGCTTCGTC TCGCCCAGCC ACTTCAGCAA GTGCTACACC
GCCTTCTACG GCTACCCGCC GTCGAAAGAA GTGCGCTACG GCAACGTCCG CTCGACGAAA
TGA
 
Protein sequence
MERRRFSAAL QGQNLRFTGA GEGGSARARV GFLLLEHFSL PAFTQALDTL VTANLIRSES 
FAVSNFSLSG EPVTSDLGLL ICPDLALASA ARQGLDLLVV CGGLRTPLRS SAALREALQD
VASRGVALAG LWNGAWFLGD AGLLDGYRCC IHPEHRAALA EIARNSQVTS DSYMVDRDRL
TAASPTGAFN LALEWIARRH GRDLVEAVVD ILAFEESRYR RVRPALHEKM SEPLREVINL
MAANIEEPLS QEQLAHYVGR SRRQIERLFQ QQLGTTPVRY YLELRITECR RLLQHSDLTM
LEVLVACGFV SPSHFSKCYT AFYGYPPSKE VRYGNVRSTK