Gene PA14_09550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_09550 
Symbol 
ID4382214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp821625 
End bp822791 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content69% 
IMG OID639323326 
Producthypothetical protein 
Protein accessionYP_788915 
Protein GI116052241 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2706] 3-carboxymuconate cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAGAC TGCCCACCCT CTGCCTGCTG GCCCTCGCGC CGCTCACCGG CGTGGCGCCC 
CAGGCCCAGG CCGCCAGCCT CTACAACCTG CTGGTGGGGA CCTATACCGA AGGCTCCAGC
GAGGGCATCC AGGTCTACCG CTTCGACGGC GCCGACGGCT CGGTGAAAGG CCCGCTGCGC
GTGGCCCATA CCAGCAACCC CTCGTACCTG ACCTTCGCCC CGGACCAACG CACTCTGTTC
GTGGTCAACG AGAACGGACG GGGCGGCAAG GGCGATACCG TCGGTCGCGC CACGTCCTAC
CGTTTCGATC CGATCAGCGG CCGCCTGCAA CAGATCAGCC AGGTCCAGAC CCTCGGCGAT
CATCCGACCT ACAGCAGCCT CAGCCACGAC GGTCGCTACC TGTTCGTCGC CAACTACTCG
GTACAGCCGG AAGGTTCGGT GGCGGTACTG CCGGTGCGCG CGGACGGCTC GCTGGCGCCG
GTGGTGCAGG TGGAGTCGCA CCAGGCCAGC AAGGTGCATC CGCGCCAGGT TTCCGGTCAT
GTGCACTCGG TGGTGTCCTC GCCCGACGGC CAGTACCTGT TCGCCCCCGA CCTCGGCGCC
GACAAGGTAT TCGTCTACCG CTACGCCCCG GAACAGGCCG AACGTCCACT GCAGGCGGCC
GATCCGGCAT TCGTCCCGAC CCCGCCCGGC AGCGGCCCGC GCCATCTGAT CTTCAGCGCC
GACGGGCGTT TCGCCTACCT GACCCTGGAA CTGAGCGGCC AGGTGATGGT GTTCGCCCAT
GAGGGCAATG GCCGCCTGCG TCAGTTGCAG ACCCACGACC TGGCGCCTGC CGGCTTCCAG
GGCAAAGTCG GCGCCGGCGC CCTGCACCTG TCCGCCGACG GCCGCTTCCT CGGCGTGCTC
AATCGCGGCG ACGACAACCA ACTGGTGACC TTCGCCGTCG ACCCGGCCAG CGGCCAGTTG
CGTTTCGTCG AACGGCGCTC GGTGGAAGGC ACCGAGCCGC GCGAATTCGC CTTCTCGCCC
GGCGGGCGCT TCGTCCTCGT GGCCAACCAG AATAGCGACC AGTTGCGGGT GTTCGCCCGC
GATCCGCAGA GCGGCCAGGT GGGCAAGACG CTGCAAAGCG TCGAGGTGGG GTCGCCGAGC
GATCTGCGCT TCGTGGCGGT GCCGTGA
 
Protein sequence
MRRLPTLCLL ALAPLTGVAP QAQAASLYNL LVGTYTEGSS EGIQVYRFDG ADGSVKGPLR 
VAHTSNPSYL TFAPDQRTLF VVNENGRGGK GDTVGRATSY RFDPISGRLQ QISQVQTLGD
HPTYSSLSHD GRYLFVANYS VQPEGSVAVL PVRADGSLAP VVQVESHQAS KVHPRQVSGH
VHSVVSSPDG QYLFAPDLGA DKVFVYRYAP EQAERPLQAA DPAFVPTPPG SGPRHLIFSA
DGRFAYLTLE LSGQVMVFAH EGNGRLRQLQ THDLAPAGFQ GKVGAGALHL SADGRFLGVL
NRGDDNQLVT FAVDPASGQL RFVERRSVEG TEPREFAFSP GGRFVLVANQ NSDQLRVFAR
DPQSGQVGKT LQSVEVGSPS DLRFVAVP