Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_09520 |
Symbol | mexI |
ID | 4382217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 816306 |
End bp | 819395 |
Gene Length | 3090 bp |
Protein Length | 1029 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639323323 |
Product | RND efflux transporter |
Protein accession | YP_788912 |
Protein GI | 116052244 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.652607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTTA CCGACCTGTT CGTCCGCCGG CCGGTGCTGG CGCTGGTGGT CAGCACGCTG ATCCTGCTGC TCGGCCTGTT CTCCCTGGGC AAGCTGCCGA TCCGCCAGTA CCCGCTGCTG GAAAGCTCGA CCATCACCGT CACCACCGAG TACCCCGGCG CCTCCGCCGA TCTCATGCAA GGCTTCGTCA CCCAGCCGAT CGCCCAGGCG GTGTCGTCGG TGGAGGGCAT CGACTACCTT TCCTCGACCT CGGTGCAGGG GCGTAGCGTG GTGACCATCC GCATGCTGCT CAACCGCGAT TCGACCCAGG CGATGACCGA GACCATGGCC AAGGTCAACT CGGTGCGCTA CAAGCTGCCC GAGCGTGCCT ACGACTCGGT GATCGAACGC TCTTCCGGCG AGACCACCGC GGTGGCCTAC GTCGGCTTTT CCAGCAAGAC CCTGCCGATC CCGGCGTTGA CCGACTACCT GTCGCGGGTG GTCGAGCCGA TGTTCTCTTC CATCGACGGC GTGGCCAAGG TCCAGACCTT TGGCGGCCAG CGCCTGGCCA TGCGCCTCTG GCTCGACGCC GACCGCCTCG CCGGGCGCGG CCTGACCGCC TCCGACGTGG CCGAGGCGAT CCGCCGCAAC AACTACCAGG CGGCGCCGGG GATGGTGAAG GGGCAGTACG TGCTGTCCAA CGTGCGGGTC AACACCGACC TGACCAACGT CGACGACTTC CGCGAGATGG TCATCCGCAA CGATGGCAAC GGCCTGGTGC GCCTGCGCGA CGTCGGTACC GTCGAACTGG GCGCCGCGGC CACCGAGACC AGCGCACTGA TGGACGGCGA CCCGGCGGTG CACCTGGGGT TGTTCCCGAC GCCCACCGGC AACCCGCTGG TGATCGTCGA CGGCATCCGC AAGCTGCTGC CGGAGATCCA GAAGACCCTG CCGCCGGATG TCCGCGTCGA CCTCGCCTAC GAGACTTCGC GCTTCATCCA GGCCTCCATC GACGAGGTGG TGCGGACCCT GGTGGAAGCG CTGCTGATCG TGGTGCTGGT GATCTACCTC TGCCTCGGCT CGCTGCGCAG CGTGCTGATC CCGGTGGCGA CCATTCCCCT GTCGATGCTC GGCGCCGCCG CGCTGATGCT GGCCTTCGGC TTCAGCGTCA ACCTGCTGAC CCTGCTGGCG ATGGTGCTGG CCATCGGGCT GGTGGTGGAC GACGCCATCG TGGTGGTGGA GAACGTCCAC CGCCACATCG AGGAAGGCAA GTCGCCGGTG GCGGCGGCGC TGATCGGCGC CCGCGAAGTG GCCGGCCCGG TGATCGCCAT GACCATCACC CTGGCCGCCG TGTACACCCC CATCGGCCTG ATGGGCGGCC TCACCGGCGC ACTGTTCCGC GAGTTCGCCC TGACCCTGGC GGGCGCGGTG ATCGTGTCCG GGGTGGTGGC GCTGACCCTG TCGCCGGTGA TGAGTTCGCT GCTGCTCCAG GCGCACCAGA ACGAGGGGCG CATGGGCCGC GCCGCCGAGT GGTTCTTCGG CGGCCTGACG CGGCGCTACG GGCAGGTCCT GGAGTTCTCC CTGGGCCACC GCTGGCTGAC CGGCGGCCTG GCCTTGCTGG TGTGCATCAG CCTGCCGCTG CTGTATTCGA TGCCCAAGCG CGAACTGGCG CCGACCGAGG ACCAAGCCGC GGTGCTCACC GCGATCAAGG CGCCGCAGCA CGCCAACCTC GACTACGTCG AACTGTTCGC GCGCAAGCTC GACCAGGTCT ACACCAGCAT CCCGGAAACC GTGAGCACCT GGATCATCAA CGGCACCGAC GGCCCGGCGG CGAGCTTCGG CGGGATCAAC CTGGCGGCCT GGGAAAAACG CGAGCGCGAC GCCTCGGCGA TCCAGTCCGA GCTGCAAGGC AAGGTCGGCG ACGTCGAGGG CAGCAGCATC TTCGCCTTCC AGTTGGCCGC CCTGCCCGGC TCCACCGGCG GCCTGCCGGT GCAGATGGTG CTGCGCAGCC CGCAGGACTA TCCGGTGCTC TACCGGACCA TGGAAGAGAT CAAGCAGAAG GCCCGGCAGA GCGGGCTGTT CGTGGTGGTC GACAGCGACC TCGACTACAA CAACCCGGTG GTCCAGGTCC GCATCGACCG CGCCAAGGCC AACAGCCTGG GCATCCGCAT GCAGGACATC GGCGAGTCGC TGGCGGTGCT GGTGGGCGAG AACTACGTCA ACCGCTTCGG CATGGAAGGC CGCTCCTACG ACGTGATCCC GCAGAGCCTG CGCGACCAGC GTTTCACTCC GCAAGCGCTG GCACGACAGT TCGTGCGCAC CCAGGACGGC AACCTGGTGC CGCTGTCGAC GGTGGTCCGG GTGGAGCTTC AGGTCGAACC GAACAAGCTG ATCCAGTTCG ACCAGCAGAA CGCCGCGACC CTCCAGGCGA TCCCCGCGCC CGGCGTCTCC ATGGGCCAGG CGGTGGCCTT CCTCGACGAC GTGGCGCGCG GCCTGCCGGC CGGCTTCAGC CACGACTGGC AATCCGACTC GCGGCAATAC ACCCAGGAAG GCAACACCCT GGTGTTCGCC TTCCTCGCCG CCCTGGTGGT GATCTACCTG GTGCTCGCCG CGCAGTACGA GAGCCTGGCC GACCCGCTGA TCATCCTGAT CACCGTGCCG CTGTCGATCT GCGGCGCGCT GCTGCCGCTG GCGCTGGGCT ACGCGACGAT GAACATCTAT ACGCAGATCG GCCTGGTCAC CCTGATCGGC CTGATCAGCA AGCACGGCAT CCTCATGGTC GAGTTCGCCA ACGAACTGCA ACTCCACGAG CGCCTCGACC GCCGCGCGGC GATCCTGCGC GCCGCACAGA TCCGCCTGCG GCCGGTGCTG ATGACCACCG CGGCAATGGT CTTCGGCCTG GTGCCGCTGC TCTTCGCCAG CGGCGCCGGC GCCGCCAGCC GCTTCGGCCT GGGCGTGGTG ATCGTCTCCG GGATGCTGGT CGGCACCCTC TTCACCCTGT TCGTGCTGCC CACCGTCTAT ACCCTGCTGG CGCGCAACCA CGCGGAAGTC GACAAGAGCC CGCGCAGCCG GCAACTGGCC GAGGCCGATC TGCTGGTGAA CAAGGCATGA
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Protein sequence | MTFTDLFVRR PVLALVVSTL ILLLGLFSLG KLPIRQYPLL ESSTITVTTE YPGASADLMQ GFVTQPIAQA VSSVEGIDYL SSTSVQGRSV VTIRMLLNRD STQAMTETMA KVNSVRYKLP ERAYDSVIER SSGETTAVAY VGFSSKTLPI PALTDYLSRV VEPMFSSIDG VAKVQTFGGQ RLAMRLWLDA DRLAGRGLTA SDVAEAIRRN NYQAAPGMVK GQYVLSNVRV NTDLTNVDDF REMVIRNDGN GLVRLRDVGT VELGAAATET SALMDGDPAV HLGLFPTPTG NPLVIVDGIR KLLPEIQKTL PPDVRVDLAY ETSRFIQASI DEVVRTLVEA LLIVVLVIYL CLGSLRSVLI PVATIPLSML GAAALMLAFG FSVNLLTLLA MVLAIGLVVD DAIVVVENVH RHIEEGKSPV AAALIGAREV AGPVIAMTIT LAAVYTPIGL MGGLTGALFR EFALTLAGAV IVSGVVALTL SPVMSSLLLQ AHQNEGRMGR AAEWFFGGLT RRYGQVLEFS LGHRWLTGGL ALLVCISLPL LYSMPKRELA PTEDQAAVLT AIKAPQHANL DYVELFARKL DQVYTSIPET VSTWIINGTD GPAASFGGIN LAAWEKRERD ASAIQSELQG KVGDVEGSSI FAFQLAALPG STGGLPVQMV LRSPQDYPVL YRTMEEIKQK ARQSGLFVVV DSDLDYNNPV VQVRIDRAKA NSLGIRMQDI GESLAVLVGE NYVNRFGMEG RSYDVIPQSL RDQRFTPQAL ARQFVRTQDG NLVPLSTVVR VELQVEPNKL IQFDQQNAAT LQAIPAPGVS MGQAVAFLDD VARGLPAGFS HDWQSDSRQY TQEGNTLVFA FLAALVVIYL VLAAQYESLA DPLIILITVP LSICGALLPL ALGYATMNIY TQIGLVTLIG LISKHGILMV EFANELQLHE RLDRRAAILR AAQIRLRPVL MTTAAMVFGL VPLLFASGAG AASRFGLGVV IVSGMLVGTL FTLFVLPTVY TLLARNHAEV DKSPRSRQLA EADLLVNKA
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