Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_09370 |
Symbol | |
ID | 4385693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 802793 |
End bp | 803968 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639323311 |
Product | hypothetical protein |
Protein accession | YP_788900 |
Protein GI | 116052256 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00862923 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | CTGGACCTCC TGCTGAACCT GCACAAGAGC CTGTTCGTCG GCTTCCCCGG GCGGGTGCTG GTCAGCCTGT TCGGCGTATC GCTGTTGCTG CTGTGCCTGG CCGGCGTGCT GCTGCACAGC CGCCGCTGGC GCGACCTGCG GCGTTGGCGG CGGGATCGCG GGCTGCGCCT GGCGCTGTTC GACCTGCATG GCCTGATCGG CATCTGGGGA CTGCCCTGGC TGCTGTTGTT CGGTTTCACC GGCGCGCTCA GCGGGCTGGG CGCTCTCGGG ACCCTGCTGC TGGCGCCGGT GGCCTACCCG CAGGAACCGA ACCGGGTGTT TGTCGAGTTG ATGGGACCGC CGCCGCCCGC CGCCGAGGGG CGGCCATTGG CGTCCCGCAT CGATCTCGAC CGCCTGCTTG CCGGCGATGC CGTGCGGGCG CCCGGCTTCG TTGCCCAGCG TTTGAGCCTC AGCCATGCCG GGGATGTCGC CGGCAGCGTG GAGATCGCCG GTATCCAGCG TGGCCTGCCG AGTACCGCGA ACTTCGAGCG GCACCGCTAT CGGCTGGCCG ACGGCGCCCT GCTCGGCGAG CGCAGCTCGG CGCAGCGCGG GTTCTGGCTG CGCGCCTTCA TCGCCGTGCA GCCGTTGCAT TTCGCCCAGT ACCAGTGGCT CGGGCCGGGC TGGTCCGCCG CGTTGCGCGG CCTGCACCTG GCGATGGGCC TCGGCGCCTG CCTGCTCTGC GCCAGCGGCT TGTACCTGTG GCTGCAACGA CGCGCCTCGG CGCCGGACGC CCGCGTACGG CTCTTGCAGC GCCTGAGCCA GGGTTTCTGT GCCGGCCTGG TGGCGGCGGC CGCGTTGCTC CTGCTGGGGC TGCAACTCGC CCCCTCGGAG CTACTCGCCG GACCCTGGCC GGGGCGGCTG TTCCTTGTCC TGTGGGCCGC CGCTGGCCTG GCGGCGTTGC TGCTGCCGGG CGACTGGCCG CTGGCGCGCG GGTTGCTCGG CGTCGCCGGG TTGGCCTGCC TGGCGGCCGC CGTCGCGCAC CTGGCGCCCT GGCTCATGCG CGGCCGGCTG CCGGCCCTGG GCCCCGACCT CACCTTGATC CTCTGCGGCG CGCTGCTCAT CCGGCACGCC TGGATGCAGG CGCGCGCCGC CGCGCCACCC GCCCACCCCC GTGTCACCGG AGACCACCAT GCTTGA
|
Protein sequence | MDLLLNLHKS LFVGFPGRVL VSLFGVSLLL LCLAGVLLHS RRWRDLRRWR RDRGLRLALF DLHGLIGIWG LPWLLLFGFT GALSGLGALG TLLLAPVAYP QEPNRVFVEL MGPPPPAAEG RPLASRIDLD RLLAGDAVRA PGFVAQRLSL SHAGDVAGSV EIAGIQRGLP STANFERHRY RLADGALLGE RSSAQRGFWL RAFIAVQPLH FAQYQWLGPG WSAALRGLHL AMGLGACLLC ASGLYLWLQR RASAPDARVR LLQRLSQGFC AGLVAAAALL LLGLQLAPSE LLAGPWPGRL FLVLWAAAGL AALLLPGDWP LARGLLGVAG LACLAAAVAH LAPWLMRGRL PALGPDLTLI LCGALLIRHA WMQARAAAPP AHPRVTGDHH A
|
| |