| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_09240 |
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| Symbol | pchD |
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| ID | 4385702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 782751 |
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| End bp | 784394 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639323302 |
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| Product | pyochelin biosynthesis protein PchD |
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| Protein accession | YP_788891 |
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| Protein GI | 116052265 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1021] Peptide arylation enzymes |
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| TIGRFAM ID | [TIGR02275] 2,3-dihydroxybenzoate-AMP ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.248611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.861718 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCCT CGCCCGCCAC CCCATCGGCC GTCGACGACG CCCCCGACTG GCCCGCCGCC
TTCGTCCGCC GCTATCTCGA CGCCGGCCAC TGGCAGGACC AGAACTTCGC CGAAGCCCTG
GCCGCCAGCG CCGCGCGCCA TCCGCGGCGG ATCGCACTCT GCGACGACGA CCAGCGGCTC
AGCTATGCCG ACCTGCTCCA GCGCTGCCGC CGCCTGGCAG CCGGACTGCG CCAGGCCGGC
CTCGCACATG GCGACACGGT GGTGCTGCAC CTGCCCAACG GCATCGCCTT CGTCGAGACC
TGCTTCGCCC TGTTCCAGCT CGGCGTACGC CCGGTGCTCG CCCTCCCCGC CCATCGCCAG
CATGAGATCA GCGGTTTCTG CCGGTTCGCC GAGGCCAAGG CCTACATCGG CGCCGAACGG
ATCGACGGCT TCGACCCACG GCCGATGGCC CGTGAGCTGC TCGCCAGCGG CGCCTGCCGG
ATGGCGCTGA TCCACGGCGA GGCCGAGGCG CCGCTGCAAG CGCTGGCACC GCTGTACCAG
GCCGACGCGC TGGAAGACTG CGCCGCCCGC GCCGAGGATA TCGCCTGCTT CCAGTTGTCC
GGCGGCACCA CCGGCACGCC GAAGCTGATT CCCCGGCGTC ATCGCGAGTA TCTCTACAAC
GTCCGCGCCA GCGCCGAGGT CTGCGGCTTC GACGAGCACA CGGTGTACCT CACCGGCTTG
CCGATGGCGC ACAACTTCAC CCTCTGCTGC CCCGGAGTGA TCGGCACGCT GCTGGCCGGC
GGCCGCGTGG TGGTCAGCCA GCGCGCCGAT CCCGAGCATT GCTTCGCCCT GATCGCCCGT
GAACGGGTCA CCCACACCGC CCTGGTACCG CCGCTGGCGA TGCTCTGGCT GGATGCCCAG
GAAAGCCGCC GCGCCGATCT ATCCAGCCTG CGTCTGCTCC AGGTCGGCGG TTCCAGGCTC
GGCAGCAGTG CCGCGCAACG CGTCGAACCG GTGCTCGGCT GCCAGTTGCA ACAGGTGCTG
GGAATGGCCG AGGGGCTGAT CTGCTACACC CGCCTGGACG ATCCGCCCGA GCGCGTATTG
CATACCCAGG GCCGGCCGCT GTCGCCGGAC GACGAAGTGC GGGTGGTCGA CGCCGAGGGC
CGCGAGGTCG GCCCCGGCGA GGTCGGCGAA CTGACCGTGC GCGGTCCCTA CACCATCCGC
GGCTACTACC GCCTGCCCGA ACACAACGCC AAGGCCTTCA GCGCGGACGG CTTCTACCGC
ACCGGCGACC GGGTCAGCCG CGACAAGGAC GGCTACCTGG TGGTGGAGGG CCGCGACAAG
GACCAGATCA ACCGCGGCGG CGAGAAGATC GCTGCGGAAG AGGTGGAGAA CCTGCTGATC
GCCCATCCGC AGGTGCACGA CGCCACCGTC GTGGCGATGC CCGACAGCCT GCTCGGCGAG
CGCACCTGTG CCTTCGTCAT CCCGCGCCAG CCGGCACCCT CGGCGCTGAA GCTGAAGCAA
TACCTGCACG CCTGCGGGCT GGCCGCGTTC AAGGTGCCGG ACCGCATCGA GCTGGTCCCG
GCCTTCCCCC AGACCGGCAT CGGCAAGATC AGCAAGAAGG ACCTGCGCGA ACGCCTGCGC
CGCGAGCTGG AGGCCCGCGC ATGA
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| Protein sequence | MTSSPATPSA VDDAPDWPAA FVRRYLDAGH WQDQNFAEAL AASAARHPRR IALCDDDQRL
SYADLLQRCR RLAAGLRQAG LAHGDTVVLH LPNGIAFVET CFALFQLGVR PVLALPAHRQ
HEISGFCRFA EAKAYIGAER IDGFDPRPMA RELLASGACR MALIHGEAEA PLQALAPLYQ
ADALEDCAAR AEDIACFQLS GGTTGTPKLI PRRHREYLYN VRASAEVCGF DEHTVYLTGL
PMAHNFTLCC PGVIGTLLAG GRVVVSQRAD PEHCFALIAR ERVTHTALVP PLAMLWLDAQ
ESRRADLSSL RLLQVGGSRL GSSAAQRVEP VLGCQLQQVL GMAEGLICYT RLDDPPERVL
HTQGRPLSPD DEVRVVDAEG REVGPGEVGE LTVRGPYTIR GYYRLPEHNA KAFSADGFYR
TGDRVSRDKD GYLVVEGRDK DQINRGGEKI AAEEVENLLI AHPQVHDATV VAMPDSLLGE
RTCAFVIPRQ PAPSALKLKQ YLHACGLAAF KVPDRIELVP AFPQTGIGKI SKKDLRERLR
RELEARA
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