| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_09230 |
|---|
| Symbol | pchC |
|---|
| ID | 4385703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 781999 |
|---|
| End bp | 782754 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639323301 |
|---|
| Product | pyochelin biosynthetic protein PchC |
|---|
| Protein accession | YP_788890 |
|---|
| Protein GI | 116052266 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3208] Predicted thioesterase involved in non-ribosomal peptide biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.123608 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.820972 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG CCTGGGTCCG GCCGTTCCGC CTGACGCCGA TGCCGCGCCT GCGCCTGGCC
TGCTTCCCCC ATGCAGGCGG CAGCGCCAGC TTCTTCCGTA GCTGGAGCGA ACGCCTGCCG
CCAGACATCG ACCTGCTTGC CCTGCAGTAC CCGGGCCGCG AGGACCGCTT CAACGAGGCG
CCGGCTACCT GCCTGGAAGA CCTCGCCGAC GGCGCCGCCC TCGCCCTGCG CGATTTCGCC
GACGCGCCCC TGGCGCTGTT CGGCCACAGT CTCGGCGCGG CGCTGGCCTA CGAAACCGCC
CTGCGCCTGG AAAACGCCGG CGCGCCGCTG CGCCACCTGT TCGTCTCCGC CCATCCGGCA
CCGCACCGGC AACGCGGCGG CGCATTGCAC CGCGGCGACG AGGCGGCGCT GCTGGAGGAC
GTCCGCCGCC AGGGTGGCGC CAGCGAGCTA CTCGAGGACG CCGACCTGCG CGCGCTGTTC
CTGCCGATCC TGCGCGCCGA CTACCAGGCG ATCGAGACCT ACCGACGGGC GCAGCCCATC
GCCCTGGCCT GCGCCCTCGA CGTCCTCCTC GGCGAGCACG ACGAGGAAGT CAGCGCCGCC
GAGGCGCAGG CCTGGAGCGA CGCCAGCCGG ACTCCCGCCA GGCTGCGGCG CTTTCCTGGC
GGCCACTTCT ACCTGAGCGA GGGGCGCGAC GCGGTGATCG AGCACCTGCT GCGCCGCCTC
GCACATCCCG ACGCCCTTTC CCGAGAGGTT GCATGA
|
|---|
| Protein sequence | MSAAWVRPFR LTPMPRLRLA CFPHAGGSAS FFRSWSERLP PDIDLLALQY PGREDRFNEA
PATCLEDLAD GAALALRDFA DAPLALFGHS LGAALAYETA LRLENAGAPL RHLFVSAHPA
PHRQRGGALH RGDEAALLED VRRQGGASEL LEDADLRALF LPILRADYQA IETYRRAQPI
ALACALDVLL GEHDEEVSAA EAQAWSDASR TPARLRRFPG GHFYLSEGRD AVIEHLLRRL
AHPDALSREV A
|
|---|
| |