Gene PA14_09180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_09180 
SymboluvrA 
ID4382941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp775225 
End bp778062 
Gene Length2838 bp 
Protein Length945 aa 
Translation table11 
GC content66% 
IMG OID639323296 
Productexcinuclease ABC subunit A 
Protein accessionYP_788885 
Protein GI116052270 
COG category[L] Replication, recombination and repair 
COG ID[COG0178] Excinuclease ATPase subunit 
TIGRFAM ID[TIGR00630] excinuclease ABC, A subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.533075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATAAGA TCCTGATTCG TGGGGCGCGT ACCCACAACC TGAAGAACGT CGACCTCACA 
CTGCCACGCG ACAAACTGAT CGTGATCACC GGTCTTTCCG GTTCCGGCAA GTCTTCCCTG
GCTTTCGACA CGCTCTATGC GGAAGGCCAG CGGCGCTACG TGGAATCCCT CTCGGCCTAC
GCCCGGCAGT TCCTGTCGAT GATGGAGAAG CCGGACGTGG ACACCATCGA AGGGCTGTCG
CCGGCGATTT CCATCGAACA GAAGTCCACT TCCCACAACC CACGCTCCAC CGTGGGTACG
ATCACCGAGA TCTACGACTA CCTGCGCCTG CTTTATGCCC GCGTCGGTAC CCCGCGCTGC
CCGGACCACG ACATCCCGCT GGAGGCGCAG ACCGTCAGCC AGATGGTCGA CCAGGTCCTG
GCCCTGCCGG AAGGCAGCAA GCTGATGCTG CTGGCGCCGG TGATCCGCGA GCGCAAGGGC
GAGCACCTGG CGGTGTTCGA CGAGATGCGC GCGCAGGGTT TCGTCCGCGC CCGGGTCGAC
GGCAAGCTCT ACGAACTCGA CGAAGTGCCG AAGCTGGATA AGCAGAAGAA GCACAGCATC
GATGTGGTGG TGGACCGCTT CAAGGTTCGC GCGGACCTCC AGCAACGCCT GGCCGAGTCG
TTCGAGACCG CCCTGTCCCT GGCCGACGGT ATCGCCCTGG TAGCACCGAT GGACGAGGAC
GAGGATGTCG AGGAGATCAT CTTCTCGGCG CGCTTCGCCT GCCCGGTCTG CGGCCACTCG
ATCAGCGAGC TGGAACCCAA GCTGTTCTCC TTCAACAACC CGGCCGGCGC CTGTCCGACC
TGCGACGGCC TCGGCGTGAA GCAATTCTTC GACGCGCGCC GGGTGGTCAA TGGCGAGTTG
ACCCTGGCCG AGGGCGCGAT CCGCGGCTGG GACCGGCGCA ACGTCTATTA CTTCCAGATG
CTCGGCTCGC TGGCCCAGCA TTACGGCTTC AGCCTGGAAG AACCCTTCGA CGAACTCGGC
GCCGAGCACC AGAAGGTGGT GCTCTACGGC TCCGGCCGGG AAAACGTCGA CTTCCGCTAT
CTCAACGACC GCGGCGACAT CGTCAAGCGT TCGCACCCCT TCGAAGGCAT CCTGCCGAAC
CTTGAGCGGC GCTACCGCGA GACCGAGTCG GCCACGGTCC GCGAGGAGCT GGCCAAGTTC
CTCAGCACCC AGCCCTGCCC GGATTGCCAC GGTACCCGCC TGCGCCGCGA GGCGCGGCAT
GTGTGGGTCG GCGACCGGAC GCTGCCGGCG ATCACCGCGA TGCCGGTCGG CGAGGCCTGC
GAGTATGCCG CCGGACTCAG CCTGACCGGC CGCCGTGGCG AGATCGCGGC GAAAATCCTC
AAGGAAATCC GCGACCGCCT GCAATTCCTG GTCAACGTCG GCCTCGACTA CCTGACCCTC
GACCGCAGCG CCGACACCCT GTCCGGCGGC GAAGCCCAGC GCATCCGCCT GGCCAGCCAG
ATCGGCGCCG GCCTGGTGGG AGTGATGTAC ATCCTCGACG AACCCTCGAT CGGCCTGCAC
CAACGCGACA ACGAACGCCT GCTCGGCACC CTCACCCACC TGCGCAACCT CGGCAACACG
GTGATCGTGG TCGAGCACGA CGAGGACGCG ATCCGACTCG CCGACTACGT CGTCGACATC
GGTCCGGGCG CCGGTGTGCA CGGCGGCCAG GTAGTGGCGG AAGGTACGCC CGACCAGGTG
ATGAACCACC CCGACTCGCT GACCGGCAAG TACCTTTCCG GGCGCAAGAA AATCGCGGTT
CCGGCCAAGC GCACCCCGCG CGACAAGAAG AAGCTGCTGA AGCTGAAAGG CGCCCGCGGC
AACAACCTGC AGAACGTCAA CCTGGAAATC CCGGTCGGCC TGTTCACCTG CATCACCGGG
GTCTCGGGCT CCGGCAAGTC GACGCTGATC AACAACACCC TGTTCCCGAT CACCGCCACC
GCGCTGAACG GCGCGACTAC CCTGGAAGTG GCGCCGTACG ACTCGTTCGA CGGCCTGCAG
CACCTGGACA AGGTGGTCGA CATCGACCAG AGCCCGATCG GTCGTACCCC GCGCTCCAAC
CCGGCGACCT ATACCGGCCT GTTCACGCCG ATCCGCGAAC TGTTCTCCGG CGTGCCGGAG
GCCCGCTCGC GCGGCTACGG TCCCGGCCGC TTCTCGTTCA ACGTCAAGGG CGGCCGTTGC
GAGGCCTGCC AGGGCGACGG CGTGATCAAG GTGGAGATGC ACTTCCTGCC GGACATCTAC
GTTCCCTGCG ATGTCTGCAA GGGCAAGCGC TACAACCGCG AGACCCTGGA GATCCGCTAC
AAGGGCAAGA GCATCCACGA AGTGCTGGAG ATGACCATCG AGGAAGCCCG CGAGTTCTTC
GACGCCGTCC CCGCCCTGGC GCGCAAGCTG CAGACACTGA TGGACGTCGG CCTGTCCTAC
ATCAAGCTGG GCCAGAGCGC GACCACCCTC TCGGGCGGCG AGGCACAGCG GGTCAAGCTG
TCCCGCGAGC TGTCCAAGCG CGACACCGGC AAGACCCTGT ACATCCTCGA CGAACCGACC
ACCGGCCTGC ACTTCGCCGA CATCCAGCAA CTGCTCGACG TGCTCCACCG CCTGCGCGAC
CACGGCAACA CCGTGGTGGT GATCGAGCAC AACCTGGACG TGATCAAGAC CGCCGACTGG
CTGGTCGACC TCGGCCCCGA GGGCGGCTCC AAGGGTGGCC AGATCATCGC CAACGGCACG
CCAGAGCAGG TGGCCGAGAT GCCCCAGTCG CACACCGGCC ACTTCCTCAA GCCGCTGCTG
GAACGCGATC GCGCCTGA
 
Protein sequence
MDKILIRGAR THNLKNVDLT LPRDKLIVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY 
ARQFLSMMEK PDVDTIEGLS PAISIEQKST SHNPRSTVGT ITEIYDYLRL LYARVGTPRC
PDHDIPLEAQ TVSQMVDQVL ALPEGSKLML LAPVIRERKG EHLAVFDEMR AQGFVRARVD
GKLYELDEVP KLDKQKKHSI DVVVDRFKVR ADLQQRLAES FETALSLADG IALVAPMDED
EDVEEIIFSA RFACPVCGHS ISELEPKLFS FNNPAGACPT CDGLGVKQFF DARRVVNGEL
TLAEGAIRGW DRRNVYYFQM LGSLAQHYGF SLEEPFDELG AEHQKVVLYG SGRENVDFRY
LNDRGDIVKR SHPFEGILPN LERRYRETES ATVREELAKF LSTQPCPDCH GTRLRREARH
VWVGDRTLPA ITAMPVGEAC EYAAGLSLTG RRGEIAAKIL KEIRDRLQFL VNVGLDYLTL
DRSADTLSGG EAQRIRLASQ IGAGLVGVMY ILDEPSIGLH QRDNERLLGT LTHLRNLGNT
VIVVEHDEDA IRLADYVVDI GPGAGVHGGQ VVAEGTPDQV MNHPDSLTGK YLSGRKKIAV
PAKRTPRDKK KLLKLKGARG NNLQNVNLEI PVGLFTCITG VSGSGKSTLI NNTLFPITAT
ALNGATTLEV APYDSFDGLQ HLDKVVDIDQ SPIGRTPRSN PATYTGLFTP IRELFSGVPE
ARSRGYGPGR FSFNVKGGRC EACQGDGVIK VEMHFLPDIY VPCDVCKGKR YNRETLEIRY
KGKSIHEVLE MTIEEAREFF DAVPALARKL QTLMDVGLSY IKLGQSATTL SGGEAQRVKL
SRELSKRDTG KTLYILDEPT TGLHFADIQQ LLDVLHRLRD HGNTVVVIEH NLDVIKTADW
LVDLGPEGGS KGGQIIANGT PEQVAEMPQS HTGHFLKPLL ERDRA