Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_09180 |
Symbol | uvrA |
ID | 4382941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 775225 |
End bp | 778062 |
Gene Length | 2838 bp |
Protein Length | 945 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639323296 |
Product | excinuclease ABC subunit A |
Protein accession | YP_788885 |
Protein GI | 116052270 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0178] Excinuclease ATPase subunit |
TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.533075 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGATAAGA TCCTGATTCG TGGGGCGCGT ACCCACAACC TGAAGAACGT CGACCTCACA CTGCCACGCG ACAAACTGAT CGTGATCACC GGTCTTTCCG GTTCCGGCAA GTCTTCCCTG GCTTTCGACA CGCTCTATGC GGAAGGCCAG CGGCGCTACG TGGAATCCCT CTCGGCCTAC GCCCGGCAGT TCCTGTCGAT GATGGAGAAG CCGGACGTGG ACACCATCGA AGGGCTGTCG CCGGCGATTT CCATCGAACA GAAGTCCACT TCCCACAACC CACGCTCCAC CGTGGGTACG ATCACCGAGA TCTACGACTA CCTGCGCCTG CTTTATGCCC GCGTCGGTAC CCCGCGCTGC CCGGACCACG ACATCCCGCT GGAGGCGCAG ACCGTCAGCC AGATGGTCGA CCAGGTCCTG GCCCTGCCGG AAGGCAGCAA GCTGATGCTG CTGGCGCCGG TGATCCGCGA GCGCAAGGGC GAGCACCTGG CGGTGTTCGA CGAGATGCGC GCGCAGGGTT TCGTCCGCGC CCGGGTCGAC GGCAAGCTCT ACGAACTCGA CGAAGTGCCG AAGCTGGATA AGCAGAAGAA GCACAGCATC GATGTGGTGG TGGACCGCTT CAAGGTTCGC GCGGACCTCC AGCAACGCCT GGCCGAGTCG TTCGAGACCG CCCTGTCCCT GGCCGACGGT ATCGCCCTGG TAGCACCGAT GGACGAGGAC GAGGATGTCG AGGAGATCAT CTTCTCGGCG CGCTTCGCCT GCCCGGTCTG CGGCCACTCG ATCAGCGAGC TGGAACCCAA GCTGTTCTCC TTCAACAACC CGGCCGGCGC CTGTCCGACC TGCGACGGCC TCGGCGTGAA GCAATTCTTC GACGCGCGCC GGGTGGTCAA TGGCGAGTTG ACCCTGGCCG AGGGCGCGAT CCGCGGCTGG GACCGGCGCA ACGTCTATTA CTTCCAGATG CTCGGCTCGC TGGCCCAGCA TTACGGCTTC AGCCTGGAAG AACCCTTCGA CGAACTCGGC GCCGAGCACC AGAAGGTGGT GCTCTACGGC TCCGGCCGGG AAAACGTCGA CTTCCGCTAT CTCAACGACC GCGGCGACAT CGTCAAGCGT TCGCACCCCT TCGAAGGCAT CCTGCCGAAC CTTGAGCGGC GCTACCGCGA GACCGAGTCG GCCACGGTCC GCGAGGAGCT GGCCAAGTTC CTCAGCACCC AGCCCTGCCC GGATTGCCAC GGTACCCGCC TGCGCCGCGA GGCGCGGCAT GTGTGGGTCG GCGACCGGAC GCTGCCGGCG ATCACCGCGA TGCCGGTCGG CGAGGCCTGC GAGTATGCCG CCGGACTCAG CCTGACCGGC CGCCGTGGCG AGATCGCGGC GAAAATCCTC AAGGAAATCC GCGACCGCCT GCAATTCCTG GTCAACGTCG GCCTCGACTA CCTGACCCTC GACCGCAGCG CCGACACCCT GTCCGGCGGC GAAGCCCAGC GCATCCGCCT GGCCAGCCAG ATCGGCGCCG GCCTGGTGGG AGTGATGTAC ATCCTCGACG AACCCTCGAT CGGCCTGCAC CAACGCGACA ACGAACGCCT GCTCGGCACC CTCACCCACC TGCGCAACCT CGGCAACACG GTGATCGTGG TCGAGCACGA CGAGGACGCG ATCCGACTCG CCGACTACGT CGTCGACATC GGTCCGGGCG CCGGTGTGCA CGGCGGCCAG GTAGTGGCGG AAGGTACGCC CGACCAGGTG ATGAACCACC CCGACTCGCT GACCGGCAAG TACCTTTCCG GGCGCAAGAA AATCGCGGTT CCGGCCAAGC GCACCCCGCG CGACAAGAAG AAGCTGCTGA AGCTGAAAGG CGCCCGCGGC AACAACCTGC AGAACGTCAA CCTGGAAATC CCGGTCGGCC TGTTCACCTG CATCACCGGG GTCTCGGGCT CCGGCAAGTC GACGCTGATC AACAACACCC TGTTCCCGAT CACCGCCACC GCGCTGAACG GCGCGACTAC CCTGGAAGTG GCGCCGTACG ACTCGTTCGA CGGCCTGCAG CACCTGGACA AGGTGGTCGA CATCGACCAG AGCCCGATCG GTCGTACCCC GCGCTCCAAC CCGGCGACCT ATACCGGCCT GTTCACGCCG ATCCGCGAAC TGTTCTCCGG CGTGCCGGAG GCCCGCTCGC GCGGCTACGG TCCCGGCCGC TTCTCGTTCA ACGTCAAGGG CGGCCGTTGC GAGGCCTGCC AGGGCGACGG CGTGATCAAG GTGGAGATGC ACTTCCTGCC GGACATCTAC GTTCCCTGCG ATGTCTGCAA GGGCAAGCGC TACAACCGCG AGACCCTGGA GATCCGCTAC AAGGGCAAGA GCATCCACGA AGTGCTGGAG ATGACCATCG AGGAAGCCCG CGAGTTCTTC GACGCCGTCC CCGCCCTGGC GCGCAAGCTG CAGACACTGA TGGACGTCGG CCTGTCCTAC ATCAAGCTGG GCCAGAGCGC GACCACCCTC TCGGGCGGCG AGGCACAGCG GGTCAAGCTG TCCCGCGAGC TGTCCAAGCG CGACACCGGC AAGACCCTGT ACATCCTCGA CGAACCGACC ACCGGCCTGC ACTTCGCCGA CATCCAGCAA CTGCTCGACG TGCTCCACCG CCTGCGCGAC CACGGCAACA CCGTGGTGGT GATCGAGCAC AACCTGGACG TGATCAAGAC CGCCGACTGG CTGGTCGACC TCGGCCCCGA GGGCGGCTCC AAGGGTGGCC AGATCATCGC CAACGGCACG CCAGAGCAGG TGGCCGAGAT GCCCCAGTCG CACACCGGCC ACTTCCTCAA GCCGCTGCTG GAACGCGATC GCGCCTGA
|
Protein sequence | MDKILIRGAR THNLKNVDLT LPRDKLIVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY ARQFLSMMEK PDVDTIEGLS PAISIEQKST SHNPRSTVGT ITEIYDYLRL LYARVGTPRC PDHDIPLEAQ TVSQMVDQVL ALPEGSKLML LAPVIRERKG EHLAVFDEMR AQGFVRARVD GKLYELDEVP KLDKQKKHSI DVVVDRFKVR ADLQQRLAES FETALSLADG IALVAPMDED EDVEEIIFSA RFACPVCGHS ISELEPKLFS FNNPAGACPT CDGLGVKQFF DARRVVNGEL TLAEGAIRGW DRRNVYYFQM LGSLAQHYGF SLEEPFDELG AEHQKVVLYG SGRENVDFRY LNDRGDIVKR SHPFEGILPN LERRYRETES ATVREELAKF LSTQPCPDCH GTRLRREARH VWVGDRTLPA ITAMPVGEAC EYAAGLSLTG RRGEIAAKIL KEIRDRLQFL VNVGLDYLTL DRSADTLSGG EAQRIRLASQ IGAGLVGVMY ILDEPSIGLH QRDNERLLGT LTHLRNLGNT VIVVEHDEDA IRLADYVVDI GPGAGVHGGQ VVAEGTPDQV MNHPDSLTGK YLSGRKKIAV PAKRTPRDKK KLLKLKGARG NNLQNVNLEI PVGLFTCITG VSGSGKSTLI NNTLFPITAT ALNGATTLEV APYDSFDGLQ HLDKVVDIDQ SPIGRTPRSN PATYTGLFTP IRELFSGVPE ARSRGYGPGR FSFNVKGGRC EACQGDGVIK VEMHFLPDIY VPCDVCKGKR YNRETLEIRY KGKSIHEVLE MTIEEAREFF DAVPALARKL QTLMDVGLSY IKLGQSATTL SGGEAQRVKL SRELSKRDTG KTLYILDEPT TGLHFADIQQ LLDVLHRLRD HGNTVVVIEH NLDVIKTADW LVDLGPEGGS KGGQIIANGT PEQVAEMPQS HTGHFLKPLL ERDRA
|
| |