Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_08880 |
Symbol | rplB |
ID | 4381335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 761118 |
End bp | 761939 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639323270 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_788859 |
Protein GI | 116052295 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0116261 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATCG TTAAGTGCAA ACCGACTTCC GCTGGTCGTC GCTTTGTCGT CAAGGTGGTG AATCAGGAGC TGCACAAAGG CGCTCCCTAC GCACCGCTGC TGGAAAAGAA ATCCAAGTCT GGCGGCCGTA ACAACAACGG TCGTATCACC ACCCGTCATA TCGGTGGTGG TCACAAGCAG CACTACCGTC TGGTCGACTT CCGTCGCAAC AAGGATGGCA TCCCTGCCAT CGTTGAACGC GTCGAATACG ATCCGAACCG CACTGCACAC ATCGCTCTGC TGAAGTATGC AGACGGCGAG CGTCGCTACA TCATCGCCCC CAAGGGCGTT GCTGCAGGTG ACCAGCTGAT CTCCGGTATC GGTGCGCCGA TCAAGGCAGG CAACAGCATG CCTCTGCGCA ACATCCCGGT GGGTAGCACT GTTCATGGTA TCGAGCTGAA GCCGGGTAAA GGCGCTCAGA TCGCTCGCTC CGCTGGCGCT TCCGCCCAGC TGGTCGCGCG TGAAGGTGCG TACGTAACCC TGCGTCTGCG CTCCGGTGAA ATGCGTAAAG TCCTGGCTGA GTGCCGTGCG ACCCTGGGCG AAGTCTCGAA CTCCGAGCAC AGCCTGCGTT CGCTGGGTAA AGCCGGTGCT ACGCGCTGGC GTGGTGTTCG CCCGACCGTT CGCGGCGTGG CGATGAACCC GGTCGACCAC CCGCATGGTG GTGGTGAAGG CCGTACCTCT GCTGGTCGTC ATCCGGTATC GCCGTGGGGT CTTCAGACCA AGGGTAAGAA GACTCGCTCG AACAAGCGTA CCGATAACAT GATCGTCCGC CGCCGCAAGT AA
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Protein sequence | MAIVKCKPTS AGRRFVVKVV NQELHKGAPY APLLEKKSKS GGRNNNGRIT TRHIGGGHKQ HYRLVDFRRN KDGIPAIVER VEYDPNRTAH IALLKYADGE RRYIIAPKGV AAGDQLISGI GAPIKAGNSM PLRNIPVGST VHGIELKPGK GAQIARSAGA SAQLVAREGA YVTLRLRSGE MRKVLAECRA TLGEVSNSEH SLRSLGKAGA TRWRGVRPTV RGVAMNPVDH PHGGGEGRTS AGRHPVSPWG LQTKGKKTRS NKRTDNMIVR RRK
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