Gene PA14_08880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_08880 
SymbolrplB 
ID4381335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp761118 
End bp761939 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content60% 
IMG OID639323270 
Product50S ribosomal protein L2 
Protein accessionYP_788859 
Protein GI116052295 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID[TIGR01171] ribosomal protein L2, bacterial/organellar 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0116261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCG TTAAGTGCAA ACCGACTTCC GCTGGTCGTC GCTTTGTCGT CAAGGTGGTG 
AATCAGGAGC TGCACAAAGG CGCTCCCTAC GCACCGCTGC TGGAAAAGAA ATCCAAGTCT
GGCGGCCGTA ACAACAACGG TCGTATCACC ACCCGTCATA TCGGTGGTGG TCACAAGCAG
CACTACCGTC TGGTCGACTT CCGTCGCAAC AAGGATGGCA TCCCTGCCAT CGTTGAACGC
GTCGAATACG ATCCGAACCG CACTGCACAC ATCGCTCTGC TGAAGTATGC AGACGGCGAG
CGTCGCTACA TCATCGCCCC CAAGGGCGTT GCTGCAGGTG ACCAGCTGAT CTCCGGTATC
GGTGCGCCGA TCAAGGCAGG CAACAGCATG CCTCTGCGCA ACATCCCGGT GGGTAGCACT
GTTCATGGTA TCGAGCTGAA GCCGGGTAAA GGCGCTCAGA TCGCTCGCTC CGCTGGCGCT
TCCGCCCAGC TGGTCGCGCG TGAAGGTGCG TACGTAACCC TGCGTCTGCG CTCCGGTGAA
ATGCGTAAAG TCCTGGCTGA GTGCCGTGCG ACCCTGGGCG AAGTCTCGAA CTCCGAGCAC
AGCCTGCGTT CGCTGGGTAA AGCCGGTGCT ACGCGCTGGC GTGGTGTTCG CCCGACCGTT
CGCGGCGTGG CGATGAACCC GGTCGACCAC CCGCATGGTG GTGGTGAAGG CCGTACCTCT
GCTGGTCGTC ATCCGGTATC GCCGTGGGGT CTTCAGACCA AGGGTAAGAA GACTCGCTCG
AACAAGCGTA CCGATAACAT GATCGTCCGC CGCCGCAAGT AA
 
Protein sequence
MAIVKCKPTS AGRRFVVKVV NQELHKGAPY APLLEKKSKS GGRNNNGRIT TRHIGGGHKQ 
HYRLVDFRRN KDGIPAIVER VEYDPNRTAH IALLKYADGE RRYIIAPKGV AAGDQLISGI
GAPIKAGNSM PLRNIPVGST VHGIELKPGK GAQIARSAGA SAQLVAREGA YVTLRLRSGE
MRKVLAECRA TLGEVSNSEH SLRSLGKAGA TRWRGVRPTV RGVAMNPVDH PHGGGEGRTS
AGRHPVSPWG LQTKGKKTRS NKRTDNMIVR RRK