| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_08850 |
|---|
| Symbol | rplC |
|---|
| ID | 4381338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 759559 |
|---|
| End bp | 760194 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639323267 |
|---|
| Product | 50S ribosomal protein L3 |
|---|
| Protein accession | YP_788856 |
|---|
| Protein GI | 116052298 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0087] Ribosomal protein L3 |
|---|
| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0000230335 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.0234155 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAATTG GTGTTGTCGG TCGTAAATGC GGCATGACCC GCATTTTCAC CGAGGAAGGT
GTCTCTATTC CGGTTACGGT CATCGAGGTC GAGCCGAATC GCGTCACCCA GTTCAAGACT
GAAGAAACCG ATGGCTACCG TGCAGTGCAA GTCACCGCCG GCGAGCGTCG TGCTTCTCGC
GTTACCAAAG CGCAAGCTGG TCACTTTGCC AAGGCGAATG TCGCCGCCGG TCGCGGCGTG
TGGGAATTCC GTCTGGGCGA AGAGCAGTAT GCCGCTGGTG ACCAGATCAC TGTCGATCTG
TTCCAGGCAG GCCAGATGGT AGACGTTACC GGCGAGTCCA AGGGTAAGGG CTTCGCGGGC
ACCATCAAGC GCTGGAACTT CCGTGGTCAG GATAACACCC ACGGTAACTC CGTTTCCCAC
CGCGTCCCGG GTTCCATCGG CCAGTGCCAG ACTCCTGGTC GAGTGTTCAA GGGCAAGAAA
ATGTCCGGTC ATCTGGGTGC GGAGCGGGTA ACCGTTCAAT CCCTGGAGAT CGTGCGCGTC
GATGCTGAAC GCAATCTGCT GCTGGTCAAG GGTGCCGTTC CCGGCGCTAC CGGCGGTGAT
GTGATCGTGC GTCCGGCAGC CAAGGCTCGC GGTTAA
|
|---|
| Protein sequence | MTIGVVGRKC GMTRIFTEEG VSIPVTVIEV EPNRVTQFKT EETDGYRAVQ VTAGERRASR
VTKAQAGHFA KANVAAGRGV WEFRLGEEQY AAGDQITVDL FQAGQMVDVT GESKGKGFAG
TIKRWNFRGQ DNTHGNSVSH RVPGSIGQCQ TPGRVFKGKK MSGHLGAERV TVQSLEIVRV
DAERNLLLVK GAVPGATGGD VIVRPAAKAR G
|
|---|
| |