Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_08740 |
Symbol | rplJ |
ID | 4384606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 745034 |
End bp | 745534 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639323258 |
Product | 50S ribosomal protein L10 |
Protein accession | YP_788847 |
Protein GI | 116052307 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.00037754 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCAATTA AACTCGAAGA CAAGAAGGCC ATCGTCGCTG AAGTCAACGA GGCTGCCAAA GCTGCCCTGT CCGCTGTCGT GGCCGATGCC CGTGGCGTGA CCGTAGGCGC CATGACCGGA CTCCGTAAAG AGGCCCGCGA AGCTGGTGTG TACGTGAAAG TCGTACGTAA CACCCTGCTC AAGCGCGCCG TTGAAGGCAC CCAGTTCGAC GTGCTCAACG ACGTGTTCAA AGGCCCGACC CTGATCGCTT TCTCCAACGA ACATCCGGGC GCTGCCGCTC GTATCTTCCG TGAGTTCGCC AAGGGTCAGG ACAAGTTCGA GATCAAGGCG GCTGCCTTCG AGGGTCAGTT CCTCGCAGCC AATCAGATCG ACGTACTGGC AAGCCTGCCG ACCTACGACG AAGCCGTATC GCAGCTGATG AGCGTGATTC AGGGCGCTAC CAGCAAGCTG GCTCGTACTC TGGCGGCCAT TCGCGACCAG AAAGAAGCTG CTGCCGCCTA A
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Protein sequence | MAIKLEDKKA IVAEVNEAAK AALSAVVADA RGVTVGAMTG LRKEAREAGV YVKVVRNTLL KRAVEGTQFD VLNDVFKGPT LIAFSNEHPG AAARIFREFA KGQDKFEIKA AAFEGQFLAA NQIDVLASLP TYDEAVSQLM SVIQGATSKL ARTLAAIRDQ KEAAAA
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