Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_08620 |
Symbol | birA |
ID | 4384613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 738405 |
End bp | 739343 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639323246 |
Product | biotin--protein ligase |
Protein accession | YP_788839 |
Protein GI | 116052314 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region [TIGR00122] BirA biotin operon repressor domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 61 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0000664696 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAGACCT TGCTGAAACT ACTTCAAGAC GGGCGATTCC ACTCCGGTGA GGAGTTGGGG GCGGTACTGG GCATCAGTCG CAGTGCAGTC TGGAAACGCT TGCAGCACCT GGAGGCTGAA CATGGCCTGC AGTTCCACAA GGTGCGTGGC CGGGGTTACC GCCTGGCGAG TCCCCTCAGT CTCCTGGATC CGCGGAAGAT CGACAGCCTC TGGCCTGTCG AGATCATGCC CACCGTCGAT TCAACCAATA GCGAGGCCAT GCGCAGGCTC GCGGCTGGAG CCTCGACGCC TTTCGTTATC GTCGCCGAGC AGCAGACTGC CGGGCGTGGA CGTCGCGGCC GAGCCTGGGT CAGTCCCTAT GGAGAGAACC TCTATTATTC TCTGGCCATT ACTGTCAGGG GGGGCGCTCG GGAGCTCGAA GGGTTGAGCC TGGTTGTCGG TCTCGCGGTG CTCCGGGCCC TGGAGTCCTT GGGCGTCCGG GAAGCCGGGT TGAAGTGGCC GAACGACGTT CTGCAGGGAG GCAAGAAGAT CGCCGGAATT CTCCTGGAGC TGAGTGGCGA CCCCGCGGAT CTGTGTCATG TCGTTATCGG CATAGGGATC AACGTCAACA TGAAGACCGC CACTGATATC GGCCAGCCTT GGACCTCCCT GCGCGAAGCG CTGGGGGAGC TGGTGGATCG TTCGCGGCTG CTCTCTGCTC TCAATCGGCA GTTGGCCGAT TATCTCGATA GGCATTCGCG CGAAGGCTTT GCTGCAAGTC GCGAGGAGTG GGAGTCCTGC AATCTCTGGC AGGGTGCCCA GGTCATTCTC TCGACTGCCC TGAGTTCCAT CGAGGGTCGC GTGTTGGGTG TCGATAGCCG AGGAGCGCTG CGTCTCGAGG TGGATGGCGT GGAGCAGGGT TTCAGTGGAG GGGAGCTTAG TTTGAGGTTG CGTCAATGA
|
Protein sequence | MQTLLKLLQD GRFHSGEELG AVLGISRSAV WKRLQHLEAE HGLQFHKVRG RGYRLASPLS LLDPRKIDSL WPVEIMPTVD STNSEAMRRL AAGASTPFVI VAEQQTAGRG RRGRAWVSPY GENLYYSLAI TVRGGARELE GLSLVVGLAV LRALESLGVR EAGLKWPNDV LQGGKKIAGI LLELSGDPAD LCHVVIGIGI NVNMKTATDI GQPWTSLREA LGELVDRSRL LSALNRQLAD YLDRHSREGF AASREEWESC NLWQGAQVIL STALSSIEGR VLGVDSRGAL RLEVDGVEQG FSGGELSLRL RQ
|
| |