| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_08540 |
|---|
| Symbol | |
|---|
| ID | 4383992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 729719 |
|---|
| End bp | 731062 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639323239 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_788837 |
|---|
| Protein GI | 116054392 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0000156584 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00000000118926 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGTTCCCCT CGAGCGAAGT CGAGGCCAAG AGGACCACGC TCAATCTGGA GCTTGAAAGC
AACACCGATC GCCTCCTTCA GGAGAAAGAC GACCTCCTGC CGCAATCGGT CACCAATTCC
AGCGACGAAG GCACGCCTTT CGCTCAGGTA GAAGGCGCCT CCGACGACAA CACCGCCGAG
CAAGACTCGG ACAAGCCGGG CGCATCTGTA GCCGATGCCG ACACCAAGCC CGTCGATCCC
GAGTGGAAGA CCATCACCGT CGCCAGTGGC GATACGCTGT CGACCGTATT CACCAAGGCA
GGCCTTTCCA CCTCGGCCAT GCACGACATG CTGACCAGCA GCAAGGATGC CAAGCGCTTC
ACCCATCTGA AGGTCGGCCA GGAGGTCAAG CTCAAGCTCG ACCCCAAAGG AGAGCTGCAG
GCGCTGCGAG TCAAGCAGAG CGAACTCGAG ACCATCGGCC TGGACAAGAC CGACAAGGGC
TACTCCTTCA AACGCGAGAA GGCCCAGATC GACCTGCATA CCGCCTATGC CCATGGCCGC
ATCACCAGCT CGCTGTTCGT TGCCGGTCGT AACGCCGGCC TGCCCTATAA CCTGGTCACG
TCGCTGTCGA ACATCTTCGG CTACGACATC GACTTCGCCC TCGATCTGCG TGAAGGCGAC
GAGTTCGACG TGATCTACGA ACAGCACAAG GTCAACGGCA AGCAAGTGGC GACCGGCAAT
ATCCTCGCCG CCCGCTTCGT CAACCGTGGC AAGACCTACA CCGCCGTGCG CTATACCAAC
AAGCAGGGCA ATACCAGCTA CTACCGCGCC GACGGCTCCA GCATGCGCAA GGCATTCATC
CGTACGCCGG TGGATTTCGC CCGCATCAGC TCGCGCTTCT CCCTGGGCCG CCGCCACCCG
ATCCTGAACA AGATCCGCGC GCACAAGGGC GTCGACTACG CTGCCCCCAT CGGCACACCG
ATCAAGGCCA CCGGAGACGG CAAGATCCTC GAAGCCGGAC GCAAGGGGGG CTACGGCAAC
GCCGTGGTGA TCCAGCACGG CCAGCGCTAT CGGACCATCT ACGGACACAT GAGCCGCTTC
GCCAAGGGTA TCCGCGCCGG TACCAGCGTG AAGCAGGGCC AGATCATCGG TTACGTAGGC
ATGACGGGCC TGGCCACCGG CCCGCACCTG CACTACGAGT TCCAGATCAA TGGCCGTCAC
GTCGATCCGC TGAGCGCCAA GCTGCCCATG GCGGACCCGC TCGGTGGCGC AGATCGCAAG
CGCTTCATGG CGCAGACCCA GCCGATGATC GCGCGCATGG ATCAGGAGAA GAAAACCCTC
CTGGCCCTGA ACAAGCAGCG CTGA
|
|---|
| Protein sequence | MFPSSEVEAK RTTLNLELES NTDRLLQEKD DLLPQSVTNS SDEGTPFAQV EGASDDNTAE
QDSDKPGASV ADADTKPVDP EWKTITVASG DTLSTVFTKA GLSTSAMHDM LTSSKDAKRF
THLKVGQEVK LKLDPKGELQ ALRVKQSELE TIGLDKTDKG YSFKREKAQI DLHTAYAHGR
ITSSLFVAGR NAGLPYNLVT SLSNIFGYDI DFALDLREGD EFDVIYEQHK VNGKQVATGN
ILAARFVNRG KTYTAVRYTN KQGNTSYYRA DGSSMRKAFI RTPVDFARIS SRFSLGRRHP
ILNKIRAHKG VDYAAPIGTP IKATGDGKIL EAGRKGGYGN AVVIQHGQRY RTIYGHMSRF
AKGIRAGTSV KQGQIIGYVG MTGLATGPHL HYEFQINGRH VDPLSAKLPM ADPLGGADRK
RFMAQTQPMI ARMDQEKKTL LALNKQR
|
|---|
| |