Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_08370 |
Symbol | vfr |
ID | 4383977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 717012 |
End bp | 717656 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639323224 |
Product | cAMP-regulatory protein |
Protein accession | YP_788822 |
Protein GI | 116054377 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 85 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00000340418 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTAGCTA TTACCCACAC ACCCAAACTC AAACACCTAG ACAAGCTGCT CGCACACTGT CACCGCCGCC GCTACACCGC AAAGAGCACC ATCATCTATG CCGGCGATCG CTGCGAAACG CTGTTCTTCA TCATCAAGGG TTCGGTCACC ATCCTCATCG AGGACGACGA CGGCCGCGAA ATGATCATCG GCTACCTCAA CAGCGGTGAT TTCTTCGGCG AGCTGGGATT GTTCGAAAAG GAAGGCAGCG AACAGGAACG CAGCGCCTGG GTTCGTGCCA AGGTGGAATG CGAAGTCGCC GAGATCAGCT ATGCGAAGTT CCGCGAACTG TCGCAGCAGG ACTCGGAGAT CCTCTACACC CTCGGCAGCC AGATGGCCGA CCGCCTGCGC AAGACCACCC GCAAGGTGGG CGACCTGGCC TTCCTCGACG TCACCGGACG CGTCGCCCGC ACCTTGCTGG ACCTGTGCCA GCAACCGGAC GCCATGACCC ACCCGGACGG CATGCAGATC AAGATCACCC GCCAGGAGAT CGGCCGGATC GTCGGCTGCT CGCGGGAAAT GGTCGGACGC GTGCTGAAGA GCCTGGAGGA GCAGGGCCTG GTGCATGTGA AAGGAAAGAC CATGGTGGTC TTCGGCACCC GCTGA
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Protein sequence | MVAITHTPKL KHLDKLLAHC HRRRYTAKST IIYAGDRCET LFFIIKGSVT ILIEDDDGRE MIIGYLNSGD FFGELGLFEK EGSEQERSAW VRAKVECEVA EISYAKFREL SQQDSEILYT LGSQMADRLR KTTRKVGDLA FLDVTGRVAR TLLDLCQQPD AMTHPDGMQI KITRQEIGRI VGCSREMVGR VLKSLEEQGL VHVKGKTMVV FGTR
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