Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_08160 |
Symbol | |
ID | 4383958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 700669 |
End bp | 701298 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639323205 |
Product | putative lytic enzyme |
Protein accession | YP_788803 |
Protein GI | 116054358 |
COG category | [R] General function prediction only |
COG ID | [COG3179] Predicted chitinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000000097217 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.000261863 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACTGA CCGAGCAGCA ATTGCTGCGC ATTTTTCCCA ACGCCCGCCT CGTCGCGGGC GTTTTCGTTG TGGCGTTGCA ACGGGCCATG GACGAGAGGG AGATCGACAC ACCGGCGCGG TGTGCCGCGT TTCTCGCCCA GGTCGGCCAC GAAAGCAGCC AGTTGACCCG GCTGGTGGAG AACCTCAATT ACAGCGCCCA AGGCTTGGCG GCGACCTGGC CGGGTCGCTA TCTCGGCCCC GACGGGCAGC CCAACGCGTT GGCCTTGCGG CTGGCGCGCA ATCCGCAGGC GATTGCCGAC AACACCTACG CCACGCGCAA CGGCAATGGC GACGAAGCGT CCGGCGATGG CTGGCGCTTC CGTGGGCGTG GCTTGCTACA GATCACCGGG CGTGCCAACT ACCGGTTGGT CGGAGAGGCC CTCGGCGAGC CGCTGGAAGC CGAGCCCTGG CGCCTGGAGC AGCCCGTGCC GGCGGCCCGC AGCGCTGCCT GGTGGTGGGC CGGTCACGGG CTCAACGAGC TGGCCGACCG CGGCGAGTTC GCTGCCATCA CCCGCCGCAT CAACGGCGGC CTGAATGGCC AGGCGGAGCG CCTGGCGTTG TGGCAGCGGG CCAGGGCGGT GCTGTCATGA
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Protein sequence | MKLTEQQLLR IFPNARLVAG VFVVALQRAM DEREIDTPAR CAAFLAQVGH ESSQLTRLVE NLNYSAQGLA ATWPGRYLGP DGQPNALALR LARNPQAIAD NTYATRNGNG DEASGDGWRF RGRGLLQITG RANYRLVGEA LGEPLEAEPW RLEQPVPAAR SAAWWWAGHG LNELADRGEF AAITRRINGG LNGQAERLAL WQRARAVLS
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