Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_08000 |
Symbol | |
ID | 4385491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 688551 |
End bp | 689066 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639323190 |
Product | hypothetical protein |
Protein accession | YP_788788 |
Protein GI | 116054343 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000000019047 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.000226613 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCTGAAC AGGCTGTTAC GCTCGAGGCT CTGTACGCGG CCATCGAGCA GGTACTGCGT GAGCGTCTGC CGGAGGCGCA GTTGATCGGC TTCTGGCCAG GCGTGCCGGA AAATACCCCG GCGGTTTCCC TGGAAATAGC CGAGCTACTG CCCGAGCGCG ATCCCGGTAC CGGCGAGAGT GCCCTGCTGT GCCGCCTGCA GGCGCGGATA ATGGTGCCGC CTGGTGCCGA TCGCCAGGCG GTATCCATTG CTTGCGGAAT CGTTCGGACA TTGCGCGAGC AGACCTGGAA CCTGTCTCTG GAACCGGCGC GCTTCGTACG CTCGGCCGTC GACGGCAGTC GCGAGGAGCT GAAGAGCCTG CGTGTCTGGC TGGTCGAGTG GACGCAGTCG CTGCGTCTCG GAGACCCGGA GTGGGCCTGG GAGGACCAGC CGCCGGGCAG CCTGATGCTG GGCTTCGACC CGCAGACCGG CCCCGGCCAT GAGCCGGACT ACTTCGCTCC GGAGGCGTTG GCATGA
|
Protein sequence | MPEQAVTLEA LYAAIEQVLR ERLPEAQLIG FWPGVPENTP AVSLEIAELL PERDPGTGES ALLCRLQARI MVPPGADRQA VSIACGIVRT LREQTWNLSL EPARFVRSAV DGSREELKSL RVWLVEWTQS LRLGDPEWAW EDQPPGSLML GFDPQTGPGH EPDYFAPEAL A
|
| |