| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_07870 |
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| Symbol | |
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| ID | 4385480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 678769 |
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| End bp | 679815 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639323179 |
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| Product | putative binding protein component of ABC transporter |
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| Protein accession | YP_788777 |
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| Protein GI | 116054332 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.00815045 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGAAAT CCCTGAAAGC GGCCAGCCTG AAGTTCGCCA CCCTGGCGGC CGGCCTGGCC
TGCGCGGCCC AGGCCATGGC GGTGGACCTG ACCGTGGTGT CCTTCGGCGG GGCCAACAAG
AGCGCCCAGA TCAAGGCGTT CTACGAGCCC TACCAGAAAG CCACCGGCAA CAGGATCGTT
GCCGGCGAAT ACAACGGCGA GATGGCCAAG GTCAAGGCCA TGGTCGATAC CAACAGCGTC
TCCTGGGACC TGGTGGAAGT GGAGTCGCCG GAGCTGTCGC GCGGCTGCGA CGAAGGCCTG
TTCGAGGAAC TCGACCCGGC GCAGTTCGGT AAGACCGAGG ACTTCGTGCC CGGCGCCATC
CAACCGTGCG GCGTGGGTTT CTTCGTCTGG TCCACGGTGC TCGCCTACAA CGCCGACAAG
CTGAAAAGCG CGCCGACCAG TTGGGCGGAC TTCTGGGACA TCAAGAAATT CCCCGGCAAG
CGCGGCCTGC GCAAGGGCGC CAAGTACACC CTCGAATTCG CCCTGATGGC CGATGGCGTG
GCGCCGAAGG ACGTCTACGG CGTGCTCGCC ACCAAGGAAG GCCAGGATCG TGCCTTCAAG
AAGCTCGACG AGATCAAGTC GAGCATCCAG TGGTGGGAGG CGGGCGCCCA GCCGCCGCAG
TACCTGGCTT CCGGCGATGT GGTGATGAGT TCTGCCTACA ACGGTCGGAT CGCCGCGGTG
CAGAAGGAAA GCAACCTGAA GGTGGTATGG AACGGCGGCA TCTACGATTT CGACGCCTGG
GCCATCCCGA AGGGGGCGAA GAAACAGGAA GAGACCCTGA AGTTCATCGC CTTCTCGGTG
CAGCCCCAGC AGCAGAAGAC TTACTCGGAA AACATCGCCT ACGGTCCGGC CAACAAGCAG
GCGGTGCCGC TGCTGGACAA GGCCCTGCTG AAGGACATGC CGACCACTCC GGAAAACATC
CAGAACCAGG TGGCAATGGA CGTGACCTTC TGGGCCGACT ACGGCGAACA ACTGGAACAG
CGCTTCAACG CCTGGGCGGC CAGGTAA
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| Protein sequence | MSKSLKAASL KFATLAAGLA CAAQAMAVDL TVVSFGGANK SAQIKAFYEP YQKATGNRIV
AGEYNGEMAK VKAMVDTNSV SWDLVEVESP ELSRGCDEGL FEELDPAQFG KTEDFVPGAI
QPCGVGFFVW STVLAYNADK LKSAPTSWAD FWDIKKFPGK RGLRKGAKYT LEFALMADGV
APKDVYGVLA TKEGQDRAFK KLDEIKSSIQ WWEAGAQPPQ YLASGDVVMS SAYNGRIAAV
QKESNLKVVW NGGIYDFDAW AIPKGAKKQE ETLKFIAFSV QPQQQKTYSE NIAYGPANKQ
AVPLLDKALL KDMPTTPENI QNQVAMDVTF WADYGEQLEQ RFNAWAAR
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