| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_07820 |
|---|
| Symbol | |
|---|
| ID | 4383948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 673136 |
|---|
| End bp | 675529 |
|---|
| Gene Length | 2394 bp |
|---|
| Protein Length | 797 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639323175 |
|---|
| Product | putative histidine kinase |
|---|
| Protein accession | YP_788773 |
|---|
| Protein GI | 116054328 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
[COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.0365473 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCGTC GTTGCTGTCT GCTCTTCTTC TGTCTGCTGT TGAGCCTGCC CGTGCGAGCG
GAGGAGTCGG TCGCCTTGCC GCTGACGGCA GAACTACGGA CCTGGCTGGC GGAGCATCGG
GAATTGCGCG TCGGGGTGGT CACCGAAGCG CCCTATGCCC AGTACGACCG CCGCCTGCAA
CAGTATTCCG GGGCCAACGT GGAGCTGATG GGCTGGCTGG CCACGGCAAT GCAGGTGACC
TTGCGGTGGC AGGGCTATCC CGACCAGGCG GCGCTCGACG ATGCCCTGCG CGCTGGGCGC
GTGGATATCG CTCCCGGCCT CAGCCAGACC CCAGCCGGGC TGCGCTTGTG GCTGTTCTCC
GATCCCTACC TGCGGGTTTC CCGGCTGGTG GTGGGGAAGC GCGATGGCAG CGGCAGCGTC
GAATTGGAGC AACTGGAGCG CGATACCCGG GTTGCCGTGC GTGCCGGCAG TTCGGTAGCC
GACTACCTCA GCAGCACCTA TAGCAGCCTG CAATGGGTGT CGGCCGATTC CGAACGCGAG
GTGCTGCGCG CCGTGCTCGC CGGACAGGCA CGCTACGCGG TGATCGACGA AGCGCAACTC
AGTCGCCTGA CCCGCGAACC GGAGTTCGCC GAGCTAGCGG TGGTTGGCGA TATCGGCTAC
CCGCAGCTGC TACGGGTGGC GACCCGTCGC GACTGGCCGG AACTGGCGAT GGTGGTCGAC
CAGGCGTTGC GCTCGCTGCC GCGCAAGTCC CTGGACCAGT TGCACGAGCG CTGGTTGCAA
CCCAAGTATC CGCGCCTCGG CGAGTCGCCG GGGTTCTGGC AGAACCTGTC GATCCTCCTC
GGCCTGCTGC TGGCCGGCGC GCTGGCGGCG GTGTTCCTCC AGCGGCGCCA GCAGCATGCG
CTGGAAGCCC GGCTGTACGG CGCCCGCCGC GACCTGGAGC TGCGCCAGGC GGCCGAGGAG
GCGCTGCGCC TGACCCAGTT CTCCATCGAC AACAGCACCC TGGGCATCCT CTGGGTCAAC
TGGGACAGCC GCGTACGCTA CGCCAACCGC GCCGCCGAAC AGATGCTCGG CCATGCCGAC
GGCCAACTCG TGGACCGTCC GCTGGCCGAC TTCGAGCCCG GCCTGGACAT GGACCGCTGG
TTGAATCTTT GGCGTCGTGC GCGCAATAGC GAGGAGGGCC CGCTCAGCTT CGAGACCCGC
TGCCTGCGCG CCGACGGCAG TTGGCTGCCG GCCGACGTCT CGCTTAGCTT CCTGCGCTTC
GGCACGTCCG AGTATCTGGT GGTGTTCCTC AGCGACGTCA CCGAGCGCCG CCGTGCCCGC
GAGGCATTGC AGGAAAGCGA GGCGCGGATG AAGGGCATCG CCTCCAACGT GCCGGGCATG
GTCTTCCGCC TGGAGCGCCC GCGGGCCGGC GCGTTTTCCG ACTTCGCCTA TATCAGCGAG
GGCAGCGAGG CGCTGGTCGG CTACAGCGCT CTCGAGCTGA TCGAGAGCGG CCGCGGCATT
CGTGGCCTGG TCCATCCCGA CGACCGCGAG CGCTACTGGT CGAGCCAGAT GGCTGCCCTC
GACGAGAATC GCGACTGGCA TTGGCAGGGC CGCATCCTCA CCCGCCAGGG CGAATTGCGC
TGGGCCGACA TCAAGGCTTC GGCGCGCTGT TTCGAGGATG GTCGCGCGGT CTGGGACGGG
GTGGTCTGGG ACATCACCGC GAACAAGCAG ATCGAACTCG AACTCGGCGA GTCGCGCGCC
CAGCTCCGCG AGCTGTCGGC GCACCTGGAG TCGGTGCGGG AGGAGGAGAA GGCGCGTATC
GCCCGCGAGG TCCATGATGA GCTGGGCCAG GTGCTGACGG TGCTGAAGCT GGAAACCTCG
ATGTGCGAGC TGGCCTATGC CGATGCCCAG GAGGGCCTGC GCGAACGCCT GGGCAACATG
AAAAAGCTGA TCGCCCAGTT GTTCCAGCTG GTGCGCGACG TGGCCACCGC ACTGCGCCCG
CCGATCCTCG ACGCCGGAAT CGGCTCGGCG GTGGAGTGGC AGGCGCGGCG CTTCGAGGCG
CGCACGCAGA TTCCCTGCCT GGTGGAGGTG CCGGAGAACT CGCCGCAGTT GGTCGACGCC
AAGGCTATCG GCCTGTTCCG CATCCTCCAG GAGGCGTTGA CCAATGTCAT GCGGCATGCC
GAGGCGCATA CTGTGCAACT GCGTCTGCTG CGCGAGGGCG ACGAGCTGTG CCTGAGCGTC
AGCGACGACG GTCGCGGGTT CGATGTTGCC ACGGTGGGGC GTGGCAGTTC CTTCGGCCTG
GTCGGCATGC GTGAGCGGGT GCTGATGATG GGCGGTACGC TGGACATCGA CAGTGCCCCC
GGCGAGGGCA CCACGCTCAG CGTGAGGATT CCGCTGGGCG TCGCGAGCCC GTGA
|
|---|
| Protein sequence | MLRRCCLLFF CLLLSLPVRA EESVALPLTA ELRTWLAEHR ELRVGVVTEA PYAQYDRRLQ
QYSGANVELM GWLATAMQVT LRWQGYPDQA ALDDALRAGR VDIAPGLSQT PAGLRLWLFS
DPYLRVSRLV VGKRDGSGSV ELEQLERDTR VAVRAGSSVA DYLSSTYSSL QWVSADSERE
VLRAVLAGQA RYAVIDEAQL SRLTREPEFA ELAVVGDIGY PQLLRVATRR DWPELAMVVD
QALRSLPRKS LDQLHERWLQ PKYPRLGESP GFWQNLSILL GLLLAGALAA VFLQRRQQHA
LEARLYGARR DLELRQAAEE ALRLTQFSID NSTLGILWVN WDSRVRYANR AAEQMLGHAD
GQLVDRPLAD FEPGLDMDRW LNLWRRARNS EEGPLSFETR CLRADGSWLP ADVSLSFLRF
GTSEYLVVFL SDVTERRRAR EALQESEARM KGIASNVPGM VFRLERPRAG AFSDFAYISE
GSEALVGYSA LELIESGRGI RGLVHPDDRE RYWSSQMAAL DENRDWHWQG RILTRQGELR
WADIKASARC FEDGRAVWDG VVWDITANKQ IELELGESRA QLRELSAHLE SVREEEKARI
AREVHDELGQ VLTVLKLETS MCELAYADAQ EGLRERLGNM KKLIAQLFQL VRDVATALRP
PILDAGIGSA VEWQARRFEA RTQIPCLVEV PENSPQLVDA KAIGLFRILQ EALTNVMRHA
EAHTVQLRLL REGDELCLSV SDDGRGFDVA TVGRGSSFGL VGMRERVLMM GGTLDIDSAP
GEGTTLSVRI PLGVASP
|
|---|
| |