Gene PA14_07790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_07790 
Symbol 
ID4383945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp670488 
End bp671162 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID639323172 
Productputative nucleotidyl transferase 
Protein accessionYP_788770 
Protein GI116054325 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0225083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGA TGATCCTCGC CGCCGGCCGT GGCGAGCGCA TGCGGCCGAC CACCCTGCAC 
ACGCCCAAGC CGCTGATCGA GGCCGCCGGC GTGCCATTGA TCGAGCGTCA GTTGCTGGCG
CTGCGCCAGG CCGGAGTCGA CGACTGGGTG ATCAACCATG CCTGGCTTGG CGAGCAGATC
GAGGCCTATC TCGGCGACGG CTCGCGCCTG GGCGGGCGGA TCGCCTATTC ACCCGAGGGA
GAACCGCTGG AAACCGGCGG TGGAATCTTC CGCGCCCTGC CGTTGCTCGG CGAGCAGCCG
TTCCTGTTGC TCAACGGCGA TGTCTGGAGC GACTTCGACT ACTCTCGGCT GCATCTTGCC
GACGGCGACC TGGCGCATCT GGTGCTGGTC GACAACCCGG CGCACCATCC CGCCGGCGAT
TTCCACCTGG ATGCCGGCGG ACGGGTGGGC GAGACCCGCG AAGCGGGCGG CAACCTGACC
TACAGCGGGA TCGCCGTACT GCATCCCGCG CTGTTCGAGG GCTGCCAGCC GGGCGCCTTC
AAGCTGGCGC CGCTATTGCG CAAGGCCATC GCCGCGGGGC GGGTCAGCGG CGAACACTAT
CGTGGGCAGT GGGTCGACGT CGGTACCCAC GAGCGCCTGG CGGAAGTCGA GCGATTGCTG
GCGGAGCACG CCTGA
 
Protein sequence
MKAMILAAGR GERMRPTTLH TPKPLIEAAG VPLIERQLLA LRQAGVDDWV INHAWLGEQI 
EAYLGDGSRL GGRIAYSPEG EPLETGGGIF RALPLLGEQP FLLLNGDVWS DFDYSRLHLA
DGDLAHLVLV DNPAHHPAGD FHLDAGGRVG ETREAGGNLT YSGIAVLHPA LFEGCQPGAF
KLAPLLRKAI AAGRVSGEHY RGQWVDVGTH ERLAEVERLL AEHA