| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_07650 |
|---|
| Symbol | |
|---|
| ID | 4383934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 656629 |
|---|
| End bp | 658182 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639323161 |
|---|
| Product | SpoVR family protein |
|---|
| Protein accession | YP_788759 |
|---|
| Protein GI | 116054314 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2719] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.127864 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGC GCCAGCCCAT CGCCACCGGC TCGGAATGGA CCTTCGAGCT GATCCAGCAG
TACGACCGGG AAATCAGCAG GATCGCCGAG CGCTATGCCC TGGATACCTA TCCGAACCAG
ATCGAGGTGA TCACCGCCGA GCAGATGATG GACGCCTACG CCTCGGTGGG CATGCCGATC
GGCTATAACC ACTGGTCCTA CGGCAAGCAC TTCCTCAGTA CGGAAAAGAA CTACAAGCGT
GGCCAGATGG GCCTGGCCTA CGAGATCGTG ATCAACTCCG ACCCCTGCAT CGCCTACCTG
ATGGAGGAAA ACACCCAGTG CATGCAGGCG CTGGTGATCG CCCACGCCTG CTACGGGCAC
AACAGTTTCT TCAAGGGCAA CTACCTGTTC CGCACCTGGA CCGATGCCAG TTCGATCATC
GATTACCTGG TGTTCGCCAA GCAGTACATC ATGCAGTGCG AGGAGCGCTA CGGGATCGAC
GCGGTGGAAG ACCTGCTCGA CTCCTGCCAC GCCCTGATGA ACTACGGTGT CGACCGCTAC
AAGCGGCCCT ACCCGATTTC CGCGGAAGAG GAGCGGCAGC GGCAGAAGGA GCGCGAGGAA
CTGATCCAGC GCCAGGTCAA CGACCTCTGG CGGACCATCC CGCGCGTCGG CGGCAAGGAC
AAGGAACAAT CCATGGCGCG CTATCCGAGC GAGCCGCAGG AGAACATCCT CTACTTCATC
GAGAAGAACG CGCCGCTTCT GGAGCCCTGG CAGCGCGAGG TGATCCGCAT CGTGCGCAAG
ATCGCCCAGT ATTTCTACCC GCAACGCCAG ACCCAGGTGA TGAACGAAGG CTGGGCGACC
TTCTGGCACT ACACGCTGCT CAACGACCTC TACGACGAAG GCCTGGTCAA CGACGGCTTC
ATGATGGAGT TCCTGCAATA CCACACCAGC GTGGTCTACC AGCCGTCCTT CGACAGCCCC
TACTACAGCG GCATCAACCC CTACGCCCTG GGCTTCGCCA TGTACCGCGA CATCCGCCGC
ATCTGCGAGG AACCTACCGA CGAGGACCGC CGCTGGTTCC CGGATATCGC CGGCAGCGAC
TGGCTGGCCA CGCTGAAGTT CGCCATGAAG AGCTTCAAGG ACGAAAGCTT CATCCTGCAG
TTCCTCTCGC CCAAGGTGAT TCGCGACCTG AAGCTGTTCA GCATTCTCGA CGACGACCAG
AAGGACGACC TGCTGGTCGC GGCGATCCAC GACGAAGCCG GCTACCGCAC CATCCGCGAG
ACCCTGGCGG CGCAGTACAA CCTCGGCAAC CGCGAGCCGA ACATCCAGAT CTGGAACGTC
GACCGTCGCG GCGACCGCTC GCTGACCCTG CGCCACCAGC AGTTCGACCG CCAGCCGCTG
AGCGACTCCA CCGCCGACGT GCTCAAGCAC CTGCATCGCT TGTGGGGCTT CGATATCCAC
CTGGAGACCC TGCAGGGCGA CCAGCTCGTG CAGACCCACC ACATGCCGCC CAAGGGCGCC
AGCGAGGGCG AGGAAGGCTA CCCGCGCCTG GACCTGATCA TCCCGCCCAT TTGA
|
|---|
| Protein sequence | MSKRQPIATG SEWTFELIQQ YDREISRIAE RYALDTYPNQ IEVITAEQMM DAYASVGMPI
GYNHWSYGKH FLSTEKNYKR GQMGLAYEIV INSDPCIAYL MEENTQCMQA LVIAHACYGH
NSFFKGNYLF RTWTDASSII DYLVFAKQYI MQCEERYGID AVEDLLDSCH ALMNYGVDRY
KRPYPISAEE ERQRQKEREE LIQRQVNDLW RTIPRVGGKD KEQSMARYPS EPQENILYFI
EKNAPLLEPW QREVIRIVRK IAQYFYPQRQ TQVMNEGWAT FWHYTLLNDL YDEGLVNDGF
MMEFLQYHTS VVYQPSFDSP YYSGINPYAL GFAMYRDIRR ICEEPTDEDR RWFPDIAGSD
WLATLKFAMK SFKDESFILQ FLSPKVIRDL KLFSILDDDQ KDDLLVAAIH DEAGYRTIRE
TLAAQYNLGN REPNIQIWNV DRRGDRSLTL RHQQFDRQPL SDSTADVLKH LHRLWGFDIH
LETLQGDQLV QTHHMPPKGA SEGEEGYPRL DLIIPPI
|
|---|
| |