Gene PA14_07500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_07500 
Symbol 
ID4384222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp643347 
End bp647084 
Gene Length3738 bp 
Protein Length1245 aa 
Translation table11 
GC content67% 
IMG OID639323150 
Producthypothetical protein 
Protein accessionYP_788748 
Protein GI116054303 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.411522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.391796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGTC TGCAGGCCGT GCTTCTCCTG TGTCTGGCCT GCTGCTGGCC GGGGCTGGCC 
GGCGCCCTCA CGCTCACGCC CGAGGAACGG GCCTGGCTGG CCGAGCACCC GAGCATCCGC
CTGGGCGTGG ACACCTCCTG GCCGCCATTC GAGTTCCGCG ACGAACAGGG CCGCTACCAG
GGACTCGCCG CCGGCTACGT CAGCCTGCTG CAGGAACGCC TGGGCGTCAG CCTGACGCCT
GTCGAACCGA AGACCTGGAC GCAGGTCCTG GAGCAGGCCA AGGACGGTCG GCTGGACCTG
CTGCCCGGCA TCATGGCTAC CCCGGAGCGC CAGGAGTATC TGAGCTTCAC CCGGCCCTAC
CTGGACTTCC CGATCATCAT CCTGGCACGC AAGAACGGCC CGATGCCGAA GCGCATCGAC
GAGCTCTACG GACTCAAGGT CGCGGTGGTC GACCACTATG CTCCTCACGA ACTGCTGATC
GCCCAGCATC CCGACCTCAC CCTGCTGCCG CTGCCTTCGG TAGCGGCAGC CCTGCAGGCG
CTGGCCACCG GCCAGGCCGA CGCCTTCGTC GGCGACTTCG CCTCCAGCGT ATGGAACCTC
CGCCAGCTCA AGCTCAACGG CCTGGAGATC AGCGGCGAGA CGCCATACCG CTACCAACTG
GCGATGGCCG TGCCGCGCGG ACAACCGATC CTCGCCGGGA TCGTCGACAA GGTCCTCGCC
GACCTCAGCG CCGAGGAGAT CGAGCGACTC CAGGCCCCCT GGGTCGGCGG CCTGCTCGAC
CGACGTCCGG CCTGGCGCGA GATGGCGACC TACGGCCTTC CCATCGTCCT GCTGATCCTG
GTCTCGGTCG CCATACTGCT GGCCATGAAC CGCCGCCTGC GCCGCGAGGT GAGTCGCCGG
CGGCAATTGG AGCGCGAACT GCGCGACAGC GAACAGCACT ACCGGGGACT GGTGGAAAGC
CTGAATGCCA TTGCCTGGGA AATGCGCCTC GAGGAGAACC GCTTCACCTA CGTCTCGCCC
CACGCCGAAC GCCTGCTCGG CTATCCCCTC GGCGAATGGC TGCAGCCGGG CTTCTGGCAG
CGGACCCTGC ACCCCATGGA CGCCGAGTAC GCCATCCACT ACTGCATGAG CGAAAGCCAG
GCCGGACGCG ACCACAGCTT CGACTACCGG ATGCTCGCCG CCGACGGCCG GGTGGTCTGG
ATTCGCGATC TGGTCACCCC GATCGCGCAA GGCCGGGACC TGCTCCTGCG CGGTCTGATG
ATCGACATCA CCGAGGCCAA GCTCACCGAG CAGGCCATGC GCCTGTCCGA ACAGAAGTTC
GCTTCGGTGT TCCACCACTG TCCGGACATG GTGGTACTGG CCAATGGCGC CGACGGCCGC
TTCCTCGCGG TGAACAACAC CTTCGAGCAG CAGATCGGCA TCGCCGCCGA CGACGCCATC
GGCAAGACCG CCACCGAACT GGGCATCTGG GCACTCCCCG GCCTGGGCCC GCAGGTCCTG
GAAAAGCTCG GCCACGGCAA CCTGACCAAC CTCGAGGTGC CCCTGCGGCG CCGCAATGGC
AGTACCTTCA GCGCGCTGCT CAGCGCCCAG CACGTGGCCC TCGACCAGAC ACCGGCGCTG
GTGGTGGTGA TCCGCGACAT CACCCACCTG GTGGAGACCC AGGAACTGCT GCGGATCTCC
GAGGAGAAGT TCGCCAACGC CTTCCATGCC TACCCCGACG GTCTGCTGAT CAGCCGCCTC
GAAGACGGCA CGCTGATCGA CGTGAACGAA GGCTTCACCC GTCTCACCGG CTACCGCCGC
GACGAGGTCA TCTCCCGCTC CACGCTCGAA CTCGGCCTGT GGGTCGACAC CGAGGACCGC
AAGCGCCTGA TCTCGCTGGT ACGCCACCAC ACCCTGACCC AGGGCTTCAC CGCCCCTGTA
CGGGACCGCA ACGGTGGCAT CCGCCAGTGC GAGATGTCCG CCCACCGGAT CAGCATCGAT
GGCGAGGACT GCGTGCTGAC CATCGCCCGC GATATCACCG AGCGCCAGCT CATGCAGGAG
AAGCTGCAGC AGGCCGCCAC CGTCTTCGAA AGCACCGCCG AAGGCGTGAT GATCACCGAT
ACCCGCCAAC GCATCACCGC GGTCAACCGC GCCTTCAGCG AGATCACCGG CTACAGCGAG
CAGGAGGCGC TGGGACGCTC GCCCAGCCTG CTCTCCTCCG GACAACACGA CTCCAGCTTC
TACCTCGCCA TGTGGAACCA GTTGGAACGC GACGGGCACT GGCAGGGCGA GATCTGGAAC
CGACGCAAGA CCGGCGAGCT GTACCCCGAA TGGCTGACCA TCAGCGCGGT ACACAATCCG
CAGGGCGAGA TCACCCACTT CGTCGGCGTC TTCGCCGATA TCTCCACCCT CAAGTACGCC
CAGGCCCGGC TCGACTACCA GGCCCACCAC GATCCGCTCA CCGGCCTGCC CAATCGCCTG
CTGTTCGAGA GCCGGCTCAA TCACGCCCTC GACGAGGCCC GCGAAGAGAG CCGTCCCGGC
GCCGTGCTGT TCATCGACCT GGACCGCTTC AAGCACATCA ACGACAGCCT CGGCCATCCC
ATCGGCGACC TGCTGCTCAA GGCCATCGCC GAACGCCTGC GCGACCAGTT GCGCGACGTC
GATACCGTGG CCCGCCTGGG GGGCGACGAA TTCATCATCC TGCTCCCAGG CCTGCACCAG
GAAAGCGACG CCGAGCACGT CGCGCGCAAG CTGCTGAATG CCTTCACCGC GCCGTTCCAG
GCCGAAGGTC ATGAATTCTT CGTCAGCGCC AGCGTCGGCA TCGCCCTGTT CCCCAAGGAC
GGCGACGACG CCCCGACCCT GGTGAAGAAC GCCGACGCCG CCATGTACCG CGCCAAGTCG
CGGGGCCGCA GCCGCATCGA GTACTACACC CGCGAACTGA CCTACCTGGC CACCGAGCGC
ATGGCGCTGG AAACCGAACT GCGCCGCGCC CTCGAGCGCG ACGAGTTGCA GCTCTACTAC
CAACCCAAGC TGAGCCTGGA GAGTGGCCTG CTGGTCGGCG CCGAGGCACT GGTGCGCTGG
TACCATCCGC TGTTCGGGGA AATTTCCCCG GAGCGCTTCA TCCCCCTCGC CGAGGATTGC
GGCCTGATCC TGCCCCTCGG CGACTGGGTG CTGGGACACG CCTGCCAGCA GATGGGCGAA
TGGCAAAAGC TGCACGCGCC GTTCGGCCCG CTGTCGGTCA ACCTCGCCGG CGCCCAGCTC
GGCCAGCCGC AACTGATCGA ACGCCTCGAG CAACTGCTGG AGCAGTCCGG CCTGGAACCG
TCGCGGCTGC AACTGGAAAT CACCGAGAGC TTCATCATGA ACCAGACCGA GGAGGCCCTC
GCCGTCCTCC ACGGCCTCAA GCGCCTCGGC GTACAGCTGG CGATCGACGA CTTCGGCACC
GGCTACTCCT CGCTCAGCTA CCTCAAGCGC CTGCCGCTGG ACATCCTGAA GATCGACAAG
TCGTTCATCC GCGGCCTCCC CGACGATCCC CACGATGCCG CCATCACCCG CGCCATCATC
GCCCTCGGCC GCAGCATGCA GCTCACGGTG ATCGCCGAAG GCGTGGAAAC CGAAGGCCAG
CAGAGCTTCC TCACCCACGA AGGCTGCGAG CAGATCCAGG GCTTCGTCCT CAGCCCGCCG
CTGCCGGCCG AGCTGTTCGC CAGCAAATTC CTCAAACCGC GCCAGCCGAT TGGCGCTCCC
CGAGAAGCGC CGGTATAA
 
Protein sequence
MQRLQAVLLL CLACCWPGLA GALTLTPEER AWLAEHPSIR LGVDTSWPPF EFRDEQGRYQ 
GLAAGYVSLL QERLGVSLTP VEPKTWTQVL EQAKDGRLDL LPGIMATPER QEYLSFTRPY
LDFPIIILAR KNGPMPKRID ELYGLKVAVV DHYAPHELLI AQHPDLTLLP LPSVAAALQA
LATGQADAFV GDFASSVWNL RQLKLNGLEI SGETPYRYQL AMAVPRGQPI LAGIVDKVLA
DLSAEEIERL QAPWVGGLLD RRPAWREMAT YGLPIVLLIL VSVAILLAMN RRLRREVSRR
RQLERELRDS EQHYRGLVES LNAIAWEMRL EENRFTYVSP HAERLLGYPL GEWLQPGFWQ
RTLHPMDAEY AIHYCMSESQ AGRDHSFDYR MLAADGRVVW IRDLVTPIAQ GRDLLLRGLM
IDITEAKLTE QAMRLSEQKF ASVFHHCPDM VVLANGADGR FLAVNNTFEQ QIGIAADDAI
GKTATELGIW ALPGLGPQVL EKLGHGNLTN LEVPLRRRNG STFSALLSAQ HVALDQTPAL
VVVIRDITHL VETQELLRIS EEKFANAFHA YPDGLLISRL EDGTLIDVNE GFTRLTGYRR
DEVISRSTLE LGLWVDTEDR KRLISLVRHH TLTQGFTAPV RDRNGGIRQC EMSAHRISID
GEDCVLTIAR DITERQLMQE KLQQAATVFE STAEGVMITD TRQRITAVNR AFSEITGYSE
QEALGRSPSL LSSGQHDSSF YLAMWNQLER DGHWQGEIWN RRKTGELYPE WLTISAVHNP
QGEITHFVGV FADISTLKYA QARLDYQAHH DPLTGLPNRL LFESRLNHAL DEAREESRPG
AVLFIDLDRF KHINDSLGHP IGDLLLKAIA ERLRDQLRDV DTVARLGGDE FIILLPGLHQ
ESDAEHVARK LLNAFTAPFQ AEGHEFFVSA SVGIALFPKD GDDAPTLVKN ADAAMYRAKS
RGRSRIEYYT RELTYLATER MALETELRRA LERDELQLYY QPKLSLESGL LVGAEALVRW
YHPLFGEISP ERFIPLAEDC GLILPLGDWV LGHACQQMGE WQKLHAPFGP LSVNLAGAQL
GQPQLIERLE QLLEQSGLEP SRLQLEITES FIMNQTEEAL AVLHGLKRLG VQLAIDDFGT
GYSSLSYLKR LPLDILKIDK SFIRGLPDDP HDAAITRAII ALGRSMQLTV IAEGVETEGQ
QSFLTHEGCE QIQGFVLSPP LPAELFASKF LKPRQPIGAP REAPV