| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_07500 |
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| Symbol | |
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| ID | 4384222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 643347 |
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| End bp | 647084 |
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| Gene Length | 3738 bp |
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| Protein Length | 1245 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639323150 |
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| Product | hypothetical protein |
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| Protein accession | YP_788748 |
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| Protein GI | 116054303 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.411522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.391796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGTC TGCAGGCCGT GCTTCTCCTG TGTCTGGCCT GCTGCTGGCC GGGGCTGGCC
GGCGCCCTCA CGCTCACGCC CGAGGAACGG GCCTGGCTGG CCGAGCACCC GAGCATCCGC
CTGGGCGTGG ACACCTCCTG GCCGCCATTC GAGTTCCGCG ACGAACAGGG CCGCTACCAG
GGACTCGCCG CCGGCTACGT CAGCCTGCTG CAGGAACGCC TGGGCGTCAG CCTGACGCCT
GTCGAACCGA AGACCTGGAC GCAGGTCCTG GAGCAGGCCA AGGACGGTCG GCTGGACCTG
CTGCCCGGCA TCATGGCTAC CCCGGAGCGC CAGGAGTATC TGAGCTTCAC CCGGCCCTAC
CTGGACTTCC CGATCATCAT CCTGGCACGC AAGAACGGCC CGATGCCGAA GCGCATCGAC
GAGCTCTACG GACTCAAGGT CGCGGTGGTC GACCACTATG CTCCTCACGA ACTGCTGATC
GCCCAGCATC CCGACCTCAC CCTGCTGCCG CTGCCTTCGG TAGCGGCAGC CCTGCAGGCG
CTGGCCACCG GCCAGGCCGA CGCCTTCGTC GGCGACTTCG CCTCCAGCGT ATGGAACCTC
CGCCAGCTCA AGCTCAACGG CCTGGAGATC AGCGGCGAGA CGCCATACCG CTACCAACTG
GCGATGGCCG TGCCGCGCGG ACAACCGATC CTCGCCGGGA TCGTCGACAA GGTCCTCGCC
GACCTCAGCG CCGAGGAGAT CGAGCGACTC CAGGCCCCCT GGGTCGGCGG CCTGCTCGAC
CGACGTCCGG CCTGGCGCGA GATGGCGACC TACGGCCTTC CCATCGTCCT GCTGATCCTG
GTCTCGGTCG CCATACTGCT GGCCATGAAC CGCCGCCTGC GCCGCGAGGT GAGTCGCCGG
CGGCAATTGG AGCGCGAACT GCGCGACAGC GAACAGCACT ACCGGGGACT GGTGGAAAGC
CTGAATGCCA TTGCCTGGGA AATGCGCCTC GAGGAGAACC GCTTCACCTA CGTCTCGCCC
CACGCCGAAC GCCTGCTCGG CTATCCCCTC GGCGAATGGC TGCAGCCGGG CTTCTGGCAG
CGGACCCTGC ACCCCATGGA CGCCGAGTAC GCCATCCACT ACTGCATGAG CGAAAGCCAG
GCCGGACGCG ACCACAGCTT CGACTACCGG ATGCTCGCCG CCGACGGCCG GGTGGTCTGG
ATTCGCGATC TGGTCACCCC GATCGCGCAA GGCCGGGACC TGCTCCTGCG CGGTCTGATG
ATCGACATCA CCGAGGCCAA GCTCACCGAG CAGGCCATGC GCCTGTCCGA ACAGAAGTTC
GCTTCGGTGT TCCACCACTG TCCGGACATG GTGGTACTGG CCAATGGCGC CGACGGCCGC
TTCCTCGCGG TGAACAACAC CTTCGAGCAG CAGATCGGCA TCGCCGCCGA CGACGCCATC
GGCAAGACCG CCACCGAACT GGGCATCTGG GCACTCCCCG GCCTGGGCCC GCAGGTCCTG
GAAAAGCTCG GCCACGGCAA CCTGACCAAC CTCGAGGTGC CCCTGCGGCG CCGCAATGGC
AGTACCTTCA GCGCGCTGCT CAGCGCCCAG CACGTGGCCC TCGACCAGAC ACCGGCGCTG
GTGGTGGTGA TCCGCGACAT CACCCACCTG GTGGAGACCC AGGAACTGCT GCGGATCTCC
GAGGAGAAGT TCGCCAACGC CTTCCATGCC TACCCCGACG GTCTGCTGAT CAGCCGCCTC
GAAGACGGCA CGCTGATCGA CGTGAACGAA GGCTTCACCC GTCTCACCGG CTACCGCCGC
GACGAGGTCA TCTCCCGCTC CACGCTCGAA CTCGGCCTGT GGGTCGACAC CGAGGACCGC
AAGCGCCTGA TCTCGCTGGT ACGCCACCAC ACCCTGACCC AGGGCTTCAC CGCCCCTGTA
CGGGACCGCA ACGGTGGCAT CCGCCAGTGC GAGATGTCCG CCCACCGGAT CAGCATCGAT
GGCGAGGACT GCGTGCTGAC CATCGCCCGC GATATCACCG AGCGCCAGCT CATGCAGGAG
AAGCTGCAGC AGGCCGCCAC CGTCTTCGAA AGCACCGCCG AAGGCGTGAT GATCACCGAT
ACCCGCCAAC GCATCACCGC GGTCAACCGC GCCTTCAGCG AGATCACCGG CTACAGCGAG
CAGGAGGCGC TGGGACGCTC GCCCAGCCTG CTCTCCTCCG GACAACACGA CTCCAGCTTC
TACCTCGCCA TGTGGAACCA GTTGGAACGC GACGGGCACT GGCAGGGCGA GATCTGGAAC
CGACGCAAGA CCGGCGAGCT GTACCCCGAA TGGCTGACCA TCAGCGCGGT ACACAATCCG
CAGGGCGAGA TCACCCACTT CGTCGGCGTC TTCGCCGATA TCTCCACCCT CAAGTACGCC
CAGGCCCGGC TCGACTACCA GGCCCACCAC GATCCGCTCA CCGGCCTGCC CAATCGCCTG
CTGTTCGAGA GCCGGCTCAA TCACGCCCTC GACGAGGCCC GCGAAGAGAG CCGTCCCGGC
GCCGTGCTGT TCATCGACCT GGACCGCTTC AAGCACATCA ACGACAGCCT CGGCCATCCC
ATCGGCGACC TGCTGCTCAA GGCCATCGCC GAACGCCTGC GCGACCAGTT GCGCGACGTC
GATACCGTGG CCCGCCTGGG GGGCGACGAA TTCATCATCC TGCTCCCAGG CCTGCACCAG
GAAAGCGACG CCGAGCACGT CGCGCGCAAG CTGCTGAATG CCTTCACCGC GCCGTTCCAG
GCCGAAGGTC ATGAATTCTT CGTCAGCGCC AGCGTCGGCA TCGCCCTGTT CCCCAAGGAC
GGCGACGACG CCCCGACCCT GGTGAAGAAC GCCGACGCCG CCATGTACCG CGCCAAGTCG
CGGGGCCGCA GCCGCATCGA GTACTACACC CGCGAACTGA CCTACCTGGC CACCGAGCGC
ATGGCGCTGG AAACCGAACT GCGCCGCGCC CTCGAGCGCG ACGAGTTGCA GCTCTACTAC
CAACCCAAGC TGAGCCTGGA GAGTGGCCTG CTGGTCGGCG CCGAGGCACT GGTGCGCTGG
TACCATCCGC TGTTCGGGGA AATTTCCCCG GAGCGCTTCA TCCCCCTCGC CGAGGATTGC
GGCCTGATCC TGCCCCTCGG CGACTGGGTG CTGGGACACG CCTGCCAGCA GATGGGCGAA
TGGCAAAAGC TGCACGCGCC GTTCGGCCCG CTGTCGGTCA ACCTCGCCGG CGCCCAGCTC
GGCCAGCCGC AACTGATCGA ACGCCTCGAG CAACTGCTGG AGCAGTCCGG CCTGGAACCG
TCGCGGCTGC AACTGGAAAT CACCGAGAGC TTCATCATGA ACCAGACCGA GGAGGCCCTC
GCCGTCCTCC ACGGCCTCAA GCGCCTCGGC GTACAGCTGG CGATCGACGA CTTCGGCACC
GGCTACTCCT CGCTCAGCTA CCTCAAGCGC CTGCCGCTGG ACATCCTGAA GATCGACAAG
TCGTTCATCC GCGGCCTCCC CGACGATCCC CACGATGCCG CCATCACCCG CGCCATCATC
GCCCTCGGCC GCAGCATGCA GCTCACGGTG ATCGCCGAAG GCGTGGAAAC CGAAGGCCAG
CAGAGCTTCC TCACCCACGA AGGCTGCGAG CAGATCCAGG GCTTCGTCCT CAGCCCGCCG
CTGCCGGCCG AGCTGTTCGC CAGCAAATTC CTCAAACCGC GCCAGCCGAT TGGCGCTCCC
CGAGAAGCGC CGGTATAA
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| Protein sequence | MQRLQAVLLL CLACCWPGLA GALTLTPEER AWLAEHPSIR LGVDTSWPPF EFRDEQGRYQ
GLAAGYVSLL QERLGVSLTP VEPKTWTQVL EQAKDGRLDL LPGIMATPER QEYLSFTRPY
LDFPIIILAR KNGPMPKRID ELYGLKVAVV DHYAPHELLI AQHPDLTLLP LPSVAAALQA
LATGQADAFV GDFASSVWNL RQLKLNGLEI SGETPYRYQL AMAVPRGQPI LAGIVDKVLA
DLSAEEIERL QAPWVGGLLD RRPAWREMAT YGLPIVLLIL VSVAILLAMN RRLRREVSRR
RQLERELRDS EQHYRGLVES LNAIAWEMRL EENRFTYVSP HAERLLGYPL GEWLQPGFWQ
RTLHPMDAEY AIHYCMSESQ AGRDHSFDYR MLAADGRVVW IRDLVTPIAQ GRDLLLRGLM
IDITEAKLTE QAMRLSEQKF ASVFHHCPDM VVLANGADGR FLAVNNTFEQ QIGIAADDAI
GKTATELGIW ALPGLGPQVL EKLGHGNLTN LEVPLRRRNG STFSALLSAQ HVALDQTPAL
VVVIRDITHL VETQELLRIS EEKFANAFHA YPDGLLISRL EDGTLIDVNE GFTRLTGYRR
DEVISRSTLE LGLWVDTEDR KRLISLVRHH TLTQGFTAPV RDRNGGIRQC EMSAHRISID
GEDCVLTIAR DITERQLMQE KLQQAATVFE STAEGVMITD TRQRITAVNR AFSEITGYSE
QEALGRSPSL LSSGQHDSSF YLAMWNQLER DGHWQGEIWN RRKTGELYPE WLTISAVHNP
QGEITHFVGV FADISTLKYA QARLDYQAHH DPLTGLPNRL LFESRLNHAL DEAREESRPG
AVLFIDLDRF KHINDSLGHP IGDLLLKAIA ERLRDQLRDV DTVARLGGDE FIILLPGLHQ
ESDAEHVARK LLNAFTAPFQ AEGHEFFVSA SVGIALFPKD GDDAPTLVKN ADAAMYRAKS
RGRSRIEYYT RELTYLATER MALETELRRA LERDELQLYY QPKLSLESGL LVGAEALVRW
YHPLFGEISP ERFIPLAEDC GLILPLGDWV LGHACQQMGE WQKLHAPFGP LSVNLAGAQL
GQPQLIERLE QLLEQSGLEP SRLQLEITES FIMNQTEEAL AVLHGLKRLG VQLAIDDFGT
GYSSLSYLKR LPLDILKIDK SFIRGLPDDP HDAAITRAII ALGRSMQLTV IAEGVETEGQ
QSFLTHEGCE QIQGFVLSPP LPAELFASKF LKPRQPIGAP REAPV
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