| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_07480 |
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| Symbol | |
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| ID | 4384221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 640581 |
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| End bp | 642266 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639323149 |
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| Product | putative reverse transcriptase |
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| Protein accession | YP_788747 |
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| Protein GI | 116054302 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000108992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.278112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAAC TCAGCCCATC GGCCGGGTCT GCGCTTTCCG GCGCTCCGCA GCAGTGGCAC
GACATCGACT GGTGTCGGGT CCAGCGGAAT GTCCGGGGAA TGCAGGTACG GATTGCGAAG
GCTTGTCGGG AAGGCAAATG GCGCAGGGTG AAGGCCCTAC AACGGATGCT GACCCGCTCG
ACGTCGGCCA GGTACCTGGC TGTACGGAGA GTCACTGAAA ACCAGGGCAA GCGCACGGCG
GGAGTCGACC GCGTGCTCTG GGATACGCCT GACACCAAGT GGAAAGCGGC ACAAGGGTTG
AAAAGGCGCG GGTACCAACC TCGGCCTCTA CGGCGAGTGT TCATCCCGAA GTCGAACGGA
AAGGAGCGCC CCCTGGGTAT CCCGACCATG ACTGACAGGG CAATGCAGGC ACTCTACCTG
CTCGCTCTGT CGCCCATTGC AGAAACCACC GGCGATCCGA ACAGCTATGG CTTCAGGATC
GAGCGATCCA CGGCGGATGC AATGTCCCAG TTGTTCGTTT GCCTATCCGG AAAGGCTTCG
GCCCAATGGA TACTGGAGGC GGACATACAA GGGTGTTTTG ACCACATCAA TCATGACTGG
CTACTGAACC ATGTCCCCAC GGACAAGGTG ATCCTCCGGA AATGGTTGAA GGCCGGCGTG
ATCCACAAAG GCCAGCTCCA GGCAACGGAT GCTGGAACAC CTCAAGGCGG AATCATCTCG
CCTACTTTGG CAAACATGGT GCTCGATGGC CTGGAATCAC AGCTCAAGCG ACACCTGGGC
GTGACAAGGG CGAAGAAGCT GAAACTCAAT GTGGTGCGCT ATGCGGACGA CTTCGTCATC
ACCGGTGTCT CTCCCGAGGT ACTGGAGAAA GAAGTCAAAC CCTGGGTAGA GCAGTTCCTG
GCGGTACGCG GGCTGCAGCT CTCTCTGGAG AAAACGCGGA TCGCCCACAT AGATCAGGGC
TTCGACTTCC TCGGTTGGAA CTTCCGCAAG TACAACGGGA AGCTTCTGAT CAAACCCAGC
CAGAAGAACG CGAAAGCGTT CTACGGCAAG GTGAAGGAGG TCATCGAAAC CAGCAGGACG
GCAAGGCAAG AGGACTTGAT CCGAACGCTG AATCCGATTC TGCGCGGCTG GGCGCTGTAT
CACCAGCCAG TGGTTGCCAA GCAAACGTTC AGCCGCATGG ACAACAGAGT GTTTCTCAAG
CTCTGGCGTT GGGCGAAACG GCGGCACCCG AACAAGTCAC TGGATTGGAT CAGGAGGCGA
TATTTCCGGA TTCACGGGGA CAAGACTTGG GTGTTCGCTA CCACGGTGCT GGAAAGCAAC
GGTAAGAAAC GGGAGGTCGC GCTGTACTCG CTGGCGAGCA CGCCGATTGA GCGACATAGG
AAGGTGAGTG GGGAATACAA CCCCTACGAT CCAGCCATGG AAGCAATAGG TGAAAAACTG
CGAACGGAAC GGATGTTGAA AAAGCTGAAG TACCGAACTC AGATCAGAAA CCTATACCTC
TCCCAGAAGG GGCTCTGCTC GCTCTGCAAC CAACCGATAA CCAGGGAAAC CGGGTGGCAC
GACCACCACA TCCTCTATCG CTCACAAGGC GGTGGAGACT CCCTGGAGAA CCGGGTACTA
TTGCACCCCG CTTGCCACCA GCAACTCCAT GCTCGTGGTC TGACAGTAAG CAAGCCGGCC
CGTTAG
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| Protein sequence | MKELSPSAGS ALSGAPQQWH DIDWCRVQRN VRGMQVRIAK ACREGKWRRV KALQRMLTRS
TSARYLAVRR VTENQGKRTA GVDRVLWDTP DTKWKAAQGL KRRGYQPRPL RRVFIPKSNG
KERPLGIPTM TDRAMQALYL LALSPIAETT GDPNSYGFRI ERSTADAMSQ LFVCLSGKAS
AQWILEADIQ GCFDHINHDW LLNHVPTDKV ILRKWLKAGV IHKGQLQATD AGTPQGGIIS
PTLANMVLDG LESQLKRHLG VTRAKKLKLN VVRYADDFVI TGVSPEVLEK EVKPWVEQFL
AVRGLQLSLE KTRIAHIDQG FDFLGWNFRK YNGKLLIKPS QKNAKAFYGK VKEVIETSRT
ARQEDLIRTL NPILRGWALY HQPVVAKQTF SRMDNRVFLK LWRWAKRRHP NKSLDWIRRR
YFRIHGDKTW VFATTVLESN GKKREVALYS LASTPIERHR KVSGEYNPYD PAMEAIGEKL
RTERMLKKLK YRTQIRNLYL SQKGLCSLCN QPITRETGWH DHHILYRSQG GGDSLENRVL
LHPACHQQLH ARGLTVSKPA R
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