Gene PA14_07340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_07340 
Symbol 
ID4384210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp630641 
End bp631552 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content70% 
IMG OID639323136 
Productputative transcriptional regulator 
Protein accessionYP_788735 
Protein GI116054291 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCAC TCGACCGGCT CATCCAGCTC GCCAACCTGC AGGGCCGCCT CGACCAGCGC 
TGCCAGCTAC AGGGCAGCTG GGCGCTGGAG CACCCGCAAG CGGTGCCCGG CGAGGCGACC
TTCCATATCG TCATGGCCGG CACCTGCTAT TGCGAATTCC TCGATGGCGC TCGCCTCGAC
CTGCATCCCG GCGACCTGAT CCTGTTGCCA CGCGGCACCC CGCACCTCCT GCGCAGCGAC
AGCCCGGCGC AACCCTGCGA ACCCACCGTG GAGCACCGCG GCAGCATCCC GCTGTACCAG
TTGAACGGCC CCGGCGAGGC CCTCGACATG CTTTGCGGCA GCTACCGCTA TCACGCCGGT
GCCAGCCTGT TCGGCGCGCT CCCCGAGCGC CTGCTGGTGC ATATGGACGA GTCGACCCAG
CAGCCCCTGC GCGCGCTGAT CGGGTTGATG CGCGAGGAAG CCGAGAGCAC CCGCAGCGGC
GCCCGCTCGA TCATCGACGC GCTGGCCACC GCGCTGTTCG CCCTGGCCCT GCGCGCCTAC
CTGGACCGCC AACCGCTGGG CGACGGCCTG TTCGGCCTGC TGGGCGACGC CCGCCTGGGA
CGAGCCCTGC GGGCCATGCT GGAACGCCCG GAGCATGCCT GGACCCTGGA ACAGCTTGCC
CAGCAGGCGG CGATGTCGCG GGCCAGTTTC GTCCGCGCCT TCTCCGCCCT CGGCGGGACC
TCGCCGTGGA TCCTGCTGAC CCGCATCCGC ATGGAAAAGG CCCGCGGCCT GCTGCGACAA
ACGCAGAAGA GCCTGCTGGA TATCGCCGCC GAGACCGGCT ACCAGTCGGA GGCGGCGTTT
TCCCGCAATT TCCGCCAGGC CTTCGGCGAA TCGCCGGGCC GTTTCCGCCG CCAGGCCGAC
TCCGCTCGCT GA
 
Protein sequence
MDPLDRLIQL ANLQGRLDQR CQLQGSWALE HPQAVPGEAT FHIVMAGTCY CEFLDGARLD 
LHPGDLILLP RGTPHLLRSD SPAQPCEPTV EHRGSIPLYQ LNGPGEALDM LCGSYRYHAG
ASLFGALPER LLVHMDESTQ QPLRALIGLM REEAESTRSG ARSIIDALAT ALFALALRAY
LDRQPLGDGL FGLLGDARLG RALRAMLERP EHAWTLEQLA QQAAMSRASF VRAFSALGGT
SPWILLTRIR MEKARGLLRQ TQKSLLDIAA ETGYQSEAAF SRNFRQAFGE SPGRFRRQAD
SAR