Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_07130 |
Symbol | tktA |
ID | 4383915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 616135 |
End bp | 618132 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639323120 |
Product | transketolase |
Protein accession | YP_788719 |
Protein GI | 116054275 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGCC GTCGTGAGCG AGCCAATGCC ATCCGTGCAC TGAGCATGGA TGCCGTGCAG AAAGCCAACA GCGGCCACCC GGGCGCCCCG ATGGGCATGG CCGATATCGC CGAGGTCCTC TGGCGCGACT ACATGCAGCA CAACCCGAGC AACCCGCAGT GGGCCAACCG CGACCGCTTC GTGCTGTCCA ACGGCCACGG CTCGATGCTG ATCTACTCCC TGCTGCACCT CACCGGGTAC GACCTCGGCA TCGAGGACCT GAAGAACTTC CGCCAGCTCA ACTCGCGCAC CCCGGGCCAT CCGGAGTACG GCTACACCGC CGGCGTCGAG ACCACCACCG GTCCGCTCGG CCAGGGCATC GCCAATGCGG TGGGCATGGC GCTGGCGGAG AAGGTCCTGG CCGCCCAGTT CAACCGCGAC GGCCACGCGG TGGTCGACCA CTACACCTAC GCCTTCCTCG GCGACGGCTG CATGATGGAA GGCATTTCCC ATGAGGTCGC CTCGCTGGCC GGCACCCTGC GCCTGAACAA GCTGATCGCC TTCTACGACG ACAACGGCAT TTCCATCGAC GGCGAGGTCC ACGGCTGGTT CACCGACGAC ACCCCGAAGC GCTTCGAGGC CTATGGCTGG CAAGTGATCC GCAACGTCGA CGGGCATGAC GCCGACGAGA TCAAGACCGC CATCGATACC GCGCGCAAGA GCGACCAGCC GACCCTGATC TGCTGCAAGA CCGTGATCGG CTTCGGCTCG CCGAACAAGC AGGGCAAGGA AGAGTGCCAC GGCGCGCCGC TGGGTGCCGA CGAGATCGCC GCGACCCGCG CCGCGCTGGG CTGGGAGCAC GCTCCGTTCG AGATCCCGGC GCAGATCTAC GCCGAGTGGG ACGCCAAGGA AACCGGCGCC GCCCAGGAAG CCGAGTGGAA CAAGCGTTTC GCCGCCTACC AGGCCGCCCA TCCGGAACTG GCCGCCGAAC TGCTGCGCCG CCTGAAGGGC GAGCTGCCGG CCGACTTCGC CGAGAAGGCC GCGGCCTACG TCGCCGATGT TGCCAACAAG GGTGAGACCA TCGCCAGCCG CAAGGCCAGC CAGAACGCGC TGAACGCCTT CGGCCCGCTG CTGCCGGAGC TGCTCGGCGG TTCCGCCGAC CTGGCCGGCT CCAACCTGAC CCTGTGGAAG GGCTGCAAGG GCGTCAGCGC CGACGACGCC GCCGGCAATT ACGTGTTCTA CGGCGTGCGC GAATTCGGCA TGAGCGCGAT CATGAATGGC GTCGCCCTGC ACGGCGGTTT CATTCCCTAC GGTGCGACCT TCCTGATCTT CATGGAATAC GCGCGCAACG CCGTGCGCAT GTCCGCACTG ATGAAGCAGC GCGTGCTCTA CGTGTTCACC CACGACTCCA TCGGCCTCGG CGAGGACGGC CCGACCCACC AGCCGATCGA ACAACTGGCC AGCCTGCGCC TGACCCCGAA CCTGGACACC TGGCGCCCGG CCGACGCGGT CGAGTCGGCG GTGGCCTGGA AGCATGCCAT CGAGCGTGCC GACGGTCCGT CCGCGCTGAT CTTCTCCCGC CAGAACCTGC CGCACCAGGC GCGCGACGTC GCCCAGGTGG CCGATATCGC CCGCGGCGGC TACGTGCTGA AGGACTGCGA AGGCGAGCCG GAACTGATCC TGATCGCCAC CGGTTCGGAA GTCGGCCTGG CCGTGCAGGC CTACGACAAG CTCAGCGAGC AGGGCCGCAA GGTCCGCGTG GTATCGATGC CGTGCACCAG CGTCTACGAG CAGCAGGACG AGTCCTACAA GCAGTCCGTG CTGCCGGTGG AAGTCGGCGC GCGCATCGCC ATCGAGGCCG CCCATGCCGA CTACTGGTAC AAGTACGTCG GTCTCGACGG GCGCATCATC GGCATGACCA GCTTCGGCGA GTCGGCTCCG GCCCCGGCGC TGTTCGAGCA CTTCGGCTTC ACCCTGGACA ACGTCCTGGC GGTGGCCGAG GAGCTGCTGG AAGACTGA
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Protein sequence | MPSRRERANA IRALSMDAVQ KANSGHPGAP MGMADIAEVL WRDYMQHNPS NPQWANRDRF VLSNGHGSML IYSLLHLTGY DLGIEDLKNF RQLNSRTPGH PEYGYTAGVE TTTGPLGQGI ANAVGMALAE KVLAAQFNRD GHAVVDHYTY AFLGDGCMME GISHEVASLA GTLRLNKLIA FYDDNGISID GEVHGWFTDD TPKRFEAYGW QVIRNVDGHD ADEIKTAIDT ARKSDQPTLI CCKTVIGFGS PNKQGKEECH GAPLGADEIA ATRAALGWEH APFEIPAQIY AEWDAKETGA AQEAEWNKRF AAYQAAHPEL AAELLRRLKG ELPADFAEKA AAYVADVANK GETIASRKAS QNALNAFGPL LPELLGGSAD LAGSNLTLWK GCKGVSADDA AGNYVFYGVR EFGMSAIMNG VALHGGFIPY GATFLIFMEY ARNAVRMSAL MKQRVLYVFT HDSIGLGEDG PTHQPIEQLA SLRLTPNLDT WRPADAVESA VAWKHAIERA DGPSALIFSR QNLPHQARDV AQVADIARGG YVLKDCEGEP ELILIATGSE VGLAVQAYDK LSEQGRKVRV VSMPCTSVYE QQDESYKQSV LPVEVGARIA IEAAHADYWY KYVGLDGRII GMTSFGESAP APALFEHFGF TLDNVLAVAE ELLED
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