Gene PA14_06960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_06960 
Symbol 
ID4383901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp603247 
End bp604536 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content70% 
IMG OID639323106 
Producthypothetical protein 
Protein accessionYP_788705 
Protein GI116054261 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCTGC AATCCAACGA GCATGTCGGC ACTTACTACG CCGCCGTCAA TCCCGAACTG 
ATCCAGCCGC GCCAGGCCCT GGAGGGTGAC CTCGACTGCG AGGTGCTGGT GGTCGGCGCC
GGTTTCAGCG GCTTGCACAC GGCGCTGCGG CTGGTCGAAG GCGGACGCCA GGTATGCGTC
ATCGAAGCCA GCCGGATCGC CTGGGCGGCC TCCGGGCGCA ACGGCGGGCA GGCGCTGCCC
GGCTGGTCCA GCGACCTGCC GCCGCTGGAG GCCGACCTCG GCTACGAAGG CGCACGCCGT
CTCTGGGACG GCATGCTCTG GGCGGCCGGC GAGATGCGCG CGTTGCCGCA GCGACATGGC
TTCGACTGCG ACTACCGGGT CGGCCACCTA TGGACGGCGA TCCTGCCGCG CCGGGTCGGC
CTGCTCTACG ACTGGCAGGC CGAGGCCAAC CGCCGCTGGG GCTACGAGGG GCTACGCTTC
GTGGCGAAGG ACGAGTTGCC CGAATGGATC GCCAGCGAGC GCTACCTTGC CGGTCTCTAC
GATCCCCACG CCGCACACCT GAATCCGCTC AAGCTGGCGT TCGGCCTGGC CGCCGCCATC
GAGCGCGCCG GCGGGCGTAT CCACGAGCGG ACCCGGGCCC TGAGCTATCG CGAGGAGGGC
GACGGCTACC GGGTCCGTAC CGAGCACGGC GAGATCCGCT GCGCGGCGCT GGTGCTGGCC
TGCAACGCCT ACATCGACGG GCTGGACAGC GAGCTGTCGC AACGGATGCT GCCGGTGGGC
ACCTATCAGG TCGCCACTGA GCCGCTCGGC GAGGAACGGG CGAAGTCGTT GCTGCCGCGC
AACTGCTGCG TGACCGACAA CCAGTTCGTC CTCGACTACT TCCGCCTGAC CCCGGACCAC
CGCCTGCTGT TCGGCGGCGG CTGCACCTAC CTGGGCGGCA TGCCCAGCGA CATCCGCGCC
GCCACCCGGC CCTATCTCGA ACGGGTGTTC CCGCAGTTGC GCGGGGTGGC GCTGGAATAC
GCCTGGGGCG GGCATATCGA CTGCAGCATG CGGCGCACCC CGGACATCGG CCGGCAGGGC
AACCGCTACT GGCTGCAAGG CTACTCCGGC CACGGCGTGC TGCCGAGTCT GGCGGCGGCC
AGGGCGGTCA GCGACGCGCT GCTCGGCGAC GACGAGACCC TGGCGCTCTA CCAGCGTCTG
CGCAATCCGA AGTTTCCCGG TGGCCAGCGC TTCGCCGCGC CGCTGGAAGC CCTGGGCAAA
GCGTATTACC GTTTGCGCGA CCTGTTCTGA
 
Protein sequence
MFLQSNEHVG TYYAAVNPEL IQPRQALEGD LDCEVLVVGA GFSGLHTALR LVEGGRQVCV 
IEASRIAWAA SGRNGGQALP GWSSDLPPLE ADLGYEGARR LWDGMLWAAG EMRALPQRHG
FDCDYRVGHL WTAILPRRVG LLYDWQAEAN RRWGYEGLRF VAKDELPEWI ASERYLAGLY
DPHAAHLNPL KLAFGLAAAI ERAGGRIHER TRALSYREEG DGYRVRTEHG EIRCAALVLA
CNAYIDGLDS ELSQRMLPVG TYQVATEPLG EERAKSLLPR NCCVTDNQFV LDYFRLTPDH
RLLFGGGCTY LGGMPSDIRA ATRPYLERVF PQLRGVALEY AWGGHIDCSM RRTPDIGRQG
NRYWLQGYSG HGVLPSLAAA RAVSDALLGD DETLALYQRL RNPKFPGGQR FAAPLEALGK
AYYRLRDLF