| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_06840 |
|---|
| Symbol | |
|---|
| ID | 4383891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 593831 |
|---|
| End bp | 595669 |
|---|
| Gene Length | 1839 bp |
|---|
| Protein Length | 612 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639323095 |
|---|
| Product | putative dinitrification protein NorD |
|---|
| Protein accession | YP_788695 |
|---|
| Protein GI | 116054251 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4548] Nitric oxide reductase activation protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTCG CCGTCGAGCT GGAGGAATGG GTCGGCGCCC ACTGGCACCG CTTCATCACC
CGCCATGCCA GCGGCGAGTT CGAGGCGGCG CGGGTGACCC TGGAGAGCAT GCGGCGTCCG
CTCGGCATGC TCTTCCGGGC GCTCGGCGGC GCACCGGGGG TAGCCCTCGA GGCGACCCCG
GCGCGCCGCC TGCTGCTACG CCGCACCTGG TTGCAGCGGG TCGCCGGGAC CTGCGAGCAG
GCCCCGGTGT CCTGGTTCAA CGGCGACAGC CTGCGCCTGC CGGAATCCCT CGCGGTCTAT
CCGCAGGCCG AGCTGAACCG TGAACTGTAT CGCTGGCTGG CGCTACTGGC GGCCAGCGCC
GGGCCGCTGC GGCACTGGGC CCAGGACAAC CAGCGCTGGG CGCGGCAGTT GCTCGATGCC
TATCCGGCGC TGCGCCCGCG CTACGCCCGG CTGGTCGCCG CGCATCTGCG CCAGCGCCCG
TCGCTGGACG ATTGCCCGGC GGCAGACGCC GAACTGGAAA TCGCCCTGCG CCGCGCGCTT
GCCGAGCCGG GCAGCGTCGA GCGCTTCCCG CGAGTCGAGC GGGCGCCCTG GCCGGTGCCG
CTGTGGCTGT ATCCCGGCGA GCGCTGGACG CCTTCCGCCA GCGCGGAGGA CGGCGAGGAA
GCGGCCGCCG GCGCCGGCAA GCGCCAGGTC GCCCGCAGCG GAGCGCGCAA GCGCGCCGAG
CGCGTCGAGG AGCGCGAGAG CGAGCGCAAC CTGCTGCTGT TCCGCCTGGA AAGCCTGCTC
AGTTGGTCGG AGCACCTGGC CCTGGACCGC TGTAGCGACG ACGAGGACGA CCCGGACGGC
GCGCGCGTCG CCGAAGACCT CGACTACCTG TCGCTGTCGC GCCAGCGCAC GCAGAAGGGC
GGCGGCCTGC GCCTGGATCT CGACCTGCCG GCCGCCGACT ACGATGACCT GCCGCTCGGC
CCCGGGCTGA AGCTGCCCGA GTGGGACTAT CGGCAGCAGC GCCTGCTGAG CGACCACGTG
CTGCTGCAAC CGATGCGGCC GCGCGGCGCG ACCAGCGCCA GCCTGCCGGC GCACCTGGAG
AAGACCGCGC TGCATCTGCG CCGCCAGTTC GCCTGCCTGC GCGACGGTCG CCAACGCCTG
CGCCAGCAGC CGCAAGGCGA CGAGATCGAC CTCGATGCCT GGCTCGACTT CCAGGTCGAG
CGGCGGCGCG GCGGTTCCAC CCAGCCAGGC CTGTTCCTCG AACAGCGGCC GCGCCGGCGC
GACCTCGCCT GCCTGTTGCT GGCGGACCTG TCGATGTCCA CCGAAGCCTA CCTCGACGAC
CAGCGGCGAG TGATCGACAG CATCGTCGAC AGCCTGCTGC TGTTCGGCGA GGCATTGCAG
GCACTGGGCG ACCCCTTCGC GCTGTACGGG TTTTCCTCGG TGCGCCGGCA GCAGGTGCGC
TGGCAGGTGC TGAAGGACTT CGACGAAGGC TACGGCGGCG AGGTCCGCGG TCGCGTGCTG
GCGCTCTCGC CGGGCTACTA CACGCGGATG GGCGCGGCGA TCCGCCGGGC CAGCCAGGAG
CTCGGCGGGC AGCCGCAGAA GCGTCGCCTG CTGTTGCTGT TGAGCGACGG CAAGCCCAAC
GACCTGGACC GCTACGAGGG CCGCTACGGC ATCGAGGACA CCCGCCAGGC GGTGATCGAG
GCGCGCAGCC AGGGACTGGT GCCGTTCTGC ATCACCATCG ACAAGGAGGC GGCGGACTAC
CTGCCCTACC TGTTCGGCGC CGACGGCTTC GCGCTGGTCG AGCGCGCCGG GCAGTTGCCC
GAGCGCCTGC TCCAGCTCTA TCGGCGCCTG CGCCGCTGA
|
|---|
| Protein sequence | MAFAVELEEW VGAHWHRFIT RHASGEFEAA RVTLESMRRP LGMLFRALGG APGVALEATP
ARRLLLRRTW LQRVAGTCEQ APVSWFNGDS LRLPESLAVY PQAELNRELY RWLALLAASA
GPLRHWAQDN QRWARQLLDA YPALRPRYAR LVAAHLRQRP SLDDCPAADA ELEIALRRAL
AEPGSVERFP RVERAPWPVP LWLYPGERWT PSASAEDGEE AAAGAGKRQV ARSGARKRAE
RVEERESERN LLLFRLESLL SWSEHLALDR CSDDEDDPDG ARVAEDLDYL SLSRQRTQKG
GGLRLDLDLP AADYDDLPLG PGLKLPEWDY RQQRLLSDHV LLQPMRPRGA TSASLPAHLE
KTALHLRRQF ACLRDGRQRL RQQPQGDEID LDAWLDFQVE RRRGGSTQPG LFLEQRPRRR
DLACLLLADL SMSTEAYLDD QRRVIDSIVD SLLLFGEALQ ALGDPFALYG FSSVRRQQVR
WQVLKDFDEG YGGEVRGRVL ALSPGYYTRM GAAIRRASQE LGGQPQKRRL LLLLSDGKPN
DLDRYEGRYG IEDTRQAVIE ARSQGLVPFC ITIDKEAADY LPYLFGADGF ALVERAGQLP
ERLLQLYRRL RR
|
|---|
| |