| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_06750 |
|---|
| Symbol | nirS |
|---|
| ID | 4383885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 588371 |
|---|
| End bp | 590077 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639323089 |
|---|
| Product | nitrite reductase precursor |
|---|
| Protein accession | YP_788689 |
|---|
| Protein GI | 116054245 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTTG GCAAGCCACT GGTGGGCACC TTGCTCGCCT CGCTGACGCT GCTGGGCCTG
GCCACCGCTC ACGCCAAGGA CGACATGAAA GCCGCCGAGC AATACCAGGG TGCCGCTTCC
GCCGTCGATC CCACTCACGT GGTGCGCACC AACGGTGCCC CCGACATGAG TGAAAGCGAG
TTCAACGAGG CCAAGCAGAT CTACTTCCAA CGCTGCGCCG GTTGCCACGG CGTCCTGCGC
AAGGGCGCCA CCGGCAAGCC GCTGACCCCG GACATCACCC AGCAACGCGG CCAGCAATAC
CTGGAAGCGC TGATCACCTA CGGCACCCCG CTGGGCATGC CGAACTGGGG CAGCTCCGGC
GAGCTGAGCA AGGACCAGAT CACCCTGATG GCCAAGTACA TCCAGCACAC CCCGCCGCAA
CCGCCGGAGT GGGGCATGCC GGAGATGCGC GAATCGTGGA AGGTGCTGGT GAAGCCGGAG
GACCGGCCGA AGAAACAGCT CAACGACCTC GACCTGCCCA ACCTGTTCTC GGTGACCCTG
CGCGACGCCG GGCAGATCGC CCTGGTCGAC GGCGACAGCA AGAAGATCGT CAAGGTCATC
GATACCGGCT ATGCCGTGCA TATCTCGCGG ATGTCCGCTT CCGGCCGCTA TCTGCTGGTG
ATCGGCCGCG ACGCGCGGAT CGACATGATC GACCTGTGGG CCAAGGAGCC GACCAAGGTC
GCCGAGATCA AGATCGGCAT CGAGGCGCGC TCGGTGGAAA GCTCCAAGTT CAAGGGCTAC
GAGGACCGCT ACACCATCGC CGGCGCCTAC TGGCCGCCGC AGTTCGCGAT CATGGACGGC
GAGACCCTGG AGCCGAAGCA GATCGTCTCC ACCCGCGGCA TGACCGTAGA CACCCAGACC
TACCACCCGG AACCGCGCGT GGCGGCGATC ATCGCCTCCC ACGAGCACCC CGAGTTCATC
GTCAACGTGA AGGAGACCGG CAAGGTCCTG CTGGTCAACT ACAAGGATAT CGACAACCTC
ACCGTCACCA GCATCGGTGC GGCGCCGTTC CTCCACGACG GCGGCTGGGA CAGCAGCCAC
CGCTACTTCA TGACCGCCGC CAACAACTCC AACAAGGTTG CCGTGATCGA CTCCAAGGAC
CGTCGCCTGT CGGCCCTGGT CGACGTCGGC AAGACCCCGC ACCCGGGGCG TGGCGCCAAC
TTCGTGCATC CCAAGTACGG CCCGGTGTGG AGCACCAGCC ACCTGGGCGA CGGCAGCATC
TCGCTGATCG GCACCGATCC GAAGAACCAT CCGCAGTACG CCTGGAAGAA AGTCGCCGAG
CTACAGGGCC AGGGCGGCGG CTCGCTGTTC ATCAAGACCC ATCCGAAGTC CTCGCACCTC
TACGTCGACA CCACCTTCAA CCCCGACGCC AGGATCAGCC AGAGCGTCGC GGTGTTCGAC
CTGAAGAACC TCGACGCCAA GTACCAGGTG CTGCCGATCG CCGAATGGGC CGATCTCGGC
GAAGGCGCCA AGCGGGTGGT GCAGCCCGAG TACAACAAGC GCGGCGATGA AGTCTGGTTC
TCGGTGTGGA ACGGCAAGAA CGACAGCTCC GCGCTGGTGG TGGTGGACGA CAAGACCCTG
AAGCTCAAGG CCGTGGTCAA GGACCCGCGG CTGATCACCC CGACCGGCAA GTTCAACGTC
TACAACACCC AGCACGACGT GTACTGA
|
|---|
| Protein sequence | MPFGKPLVGT LLASLTLLGL ATAHAKDDMK AAEQYQGAAS AVDPTHVVRT NGAPDMSESE
FNEAKQIYFQ RCAGCHGVLR KGATGKPLTP DITQQRGQQY LEALITYGTP LGMPNWGSSG
ELSKDQITLM AKYIQHTPPQ PPEWGMPEMR ESWKVLVKPE DRPKKQLNDL DLPNLFSVTL
RDAGQIALVD GDSKKIVKVI DTGYAVHISR MSASGRYLLV IGRDARIDMI DLWAKEPTKV
AEIKIGIEAR SVESSKFKGY EDRYTIAGAY WPPQFAIMDG ETLEPKQIVS TRGMTVDTQT
YHPEPRVAAI IASHEHPEFI VNVKETGKVL LVNYKDIDNL TVTSIGAAPF LHDGGWDSSH
RYFMTAANNS NKVAVIDSKD RRLSALVDVG KTPHPGRGAN FVHPKYGPVW STSHLGDGSI
SLIGTDPKNH PQYAWKKVAE LQGQGGGSLF IKTHPKSSHL YVDTTFNPDA RISQSVAVFD
LKNLDAKYQV LPIAEWADLG EGAKRVVQPE YNKRGDEVWF SVWNGKNDSS ALVVVDDKTL
KLKAVVKDPR LITPTGKFNV YNTQHDVY
|
|---|
| |