| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_06660 |
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| Symbol | nirE |
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| ID | 4383876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 582560 |
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| End bp | 583399 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639323080 |
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| Product | putative uroporphyrin-III c-methyltransferase |
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| Protein accession | YP_788680 |
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| Protein GI | 116054236 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.253082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACTA CCGTGATTCC GCCGTCCCTC CTCGATGTCG ATTTCCCTGC CGGCAGCGTC
GCCCTGGTCG GCGCCGGCCC CGGCGATCCG GGCCTGCTCA CCCTGCGCGC CTGGGCCCTG
CTGCAACAGG CCGAGGTGGT GGTCTACGAC CGCCTGGTCG CCCGCGAGCT GATCGCCCTT
CTGCCGGAAA GCTGCCAGCG CATCTACGTC GGCAAGCGCT GCGGCCACCA CAGCCTGCCG
CAGGAAGAAA TCAACGAGCT GCTGGTGCGC CTGGCCCGGC AGCAACGCCG GGTGGTCCGC
CTGAAAGGCG GCGACCCGTT CATCTTCGGT CGCGGCGCCG AGGAGCTGGA GCGCCTGCTC
GAGGCCGGCG TCGACTGCCA GGTGGTCCCC GGCGTCACCG CCGCCTCCGG TTGCAGTACC
TACGCCGGCA TCCCGCTGAC CCACCGCGAC CTCGCCCAGT CCTGCACCTT CGTCACCGGC
CACCTGCAGA ACGACGGCCG CCTCGACCTC GACTGGGCCG GCCTGGCGCG CGGCAAGCAG
ACCCTGGTGT TCTACATGGG CCTGGGCAAC CTCGCCGAGA TCGCCGCGCG CCTGGTCGAG
CACGGCCTCG CCAGCGACAC CCCGGCGGCG CTGGTCAGCC AGGGCACCCA GGCGGGCCAG
CAGGTGACCC GCGGCGCCCT TTCCGAGCTG CCGGCGCTGG CGCGGCGCTA CCAGTTGAAG
CCGCCGACGC TGATCGTCGT CGGCCAGGTG GTGGCGCTCT TCGCCGAGCG CGCGATGGCG
CATCCGTCAT ACCTGGGCGC CGGCTCGCCG GTCAGCCGCG AGGCCGTCGC ATGCGCCTGA
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| Protein sequence | MNTTVIPPSL LDVDFPAGSV ALVGAGPGDP GLLTLRAWAL LQQAEVVVYD RLVARELIAL
LPESCQRIYV GKRCGHHSLP QEEINELLVR LARQQRRVVR LKGGDPFIFG RGAEELERLL
EAGVDCQVVP GVTAASGCST YAGIPLTHRD LAQSCTFVTG HLQNDGRLDL DWAGLARGKQ
TLVFYMGLGN LAEIAARLVE HGLASDTPAA LVSQGTQAGQ QVTRGALSEL PALARRYQLK
PPTLIVVGQV VALFAERAMA HPSYLGAGSP VSREAVACA
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