Gene PA14_06540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_06540 
Symbol 
ID4383869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp572694 
End bp573518 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content73% 
IMG OID639323073 
Productputative biotin synthesis protein BioC 
Protein accessionYP_788673 
Protein GI116054229 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID[TIGR02072] biotin biosynthesis protein BioC 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACG ATTCCGCGCC GCTGCTGGCG CCCCATGGCG TTGCCGCGCT GCCCGACAAG 
CGCCGGGTCG CCGCGTCGTT TTCCCGCGCG GCGGCCAGCT ACGACGCGGT GGCCGAACTC
CAGCGCGGCG TCGGCGAGAG CCTGCTGTCG GCATTGCCGG AAGGCTTCTC GCCGCGCCGC
TGGGTCGATC TCGGCTGCGG CACCGGTCAT TTCAGCCGGG CCCTGGAACG CCGCTTTGGC
GCGGCCGAGG GCCTGGCTGT GGACATCGCC GAAGGCATGC TGCGGCATGC CCGCGCGCGC
GGCGGCGCCA GCCATTTCAT CGGCGGCGAC GCCGAGAGGC TGCCGTTGCG CGACGGCAGT
TGCGACCTGC TGTTCTCCAG CCTGGCCATC CAGTGGTGCG CCGACCTCCC GGCGGTCCTG
GCCGAGGCGC GGCGGGTCCT GCGGCCGGGC GGCGTGCTGG CGTTCAGCAG CCTGTGCGTC
GGTACCCTGG GCGAGTTGCG CGACAGTTGG CGGGTGGTGG ACGGCTTCGT CCACGTCAAT
CGCTTCCGCG CCTTCGCCGA CTACCTGCAA CACGCGGCCG GCAGCGGTCT GCTGCCGCTG
ACCCTGCGCC ACGAGGACCG GGTCCTGCAT TTCCCCGACC TGCGCAGCCT GACCCACGAA
CTCAAGGCGC TGGGCGCGCA CAACCTCAAC CCCGGGCGGC CCGACGGCCT GACCGGGCGC
CAGCGCATCC GCGCGCTGGT CGCCGCCTAC GAGCGTTTCC GCCAGCCCGA GGGGCTGCCC
GCTACCTACC GCGTCGTCTT CGGCGTGCTG CGCAAGGATT CCTGA
 
Protein sequence
MPDDSAPLLA PHGVAALPDK RRVAASFSRA AASYDAVAEL QRGVGESLLS ALPEGFSPRR 
WVDLGCGTGH FSRALERRFG AAEGLAVDIA EGMLRHARAR GGASHFIGGD AERLPLRDGS
CDLLFSSLAI QWCADLPAVL AEARRVLRPG GVLAFSSLCV GTLGELRDSW RVVDGFVHVN
RFRAFADYLQ HAAGSGLLPL TLRHEDRVLH FPDLRSLTHE LKALGAHNLN PGRPDGLTGR
QRIRALVAAY ERFRQPEGLP ATYRVVFGVL RKDS