Gene PA14_06480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_06480 
Symbol 
ID4383865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp568039 
End bp569016 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content70% 
IMG OID639323069 
Productputative hydrolase 
Protein accessionYP_788669 
Protein GI116054225 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000202222 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATTA AGGTGCTCAA GCCCGGCCTT GCCACCTCGG TGCAGGACGC CGGCCGCGAA 
GGCCACTATC ACCTGGGTAT CCCGCCGTCC GGCGCGCTCG ACCAGTACGC CCTGCGCGCG
GCCAACCTGC TGGTGGGCAA CGCACCGACC GCCGCCGTGC TGGAGTGCGC GCTGCTGGGT
CCGCAGCTGG AGTTCCAGCG CGACGCCCTG GTGGCCGTGT GCGGGGCGCG CATGACGCCT
CGCCTGGAGG GCGCGGAGAT GCCGCTGGAT ACTTCCTTCC GGGTTCGCGC CGGCCAGGTA
CTGGGGTTCG ACTTCATCCG TGCCGGCGCC CGTGGCTATC TCGCCATCGA CGGCGGCATC
GCGGTACCCG AGGTGCTGGG CAGCCGTTCG ACCTACGGTC TGGGGGCGAT CGGTGGCTTG
CAGGGACGGC GACTGGCGGA GGGCGACCTG CTGCCCCTGG GGCCTGCCTC GCCCTCTGCC
GTGGAGGGCT TGGCGCTGCC GCGCTCGTTG CAGGTGGAGG TCGGTGGCGA GGTGAGCTTG
CGGGTGGTTC CCGGGCTCTA CGTCCATCGC CTGACCCCCG ACGCGGTCGA GCGTTTCTTC
GCCGAGACCT GGACCGTCGG CTCGGAGGCG GACCGCACCG GCTACCGCTT CAAGGGCGGC
ACGGCGCTCC GGTTCGAGCC GCGCGAACAG CCATTCGGCG CAGGCTCGGA CCCGTCCAAC
ATCGTCGACG CCTGCTATCC CATCGGCTCG ATCCAGGTAC CGGGCGGGCT CGAACCCATC
GTCCTGCATC GTGATGCGGT GTCCGGTGGG GGATATGCCA CGCTGGGCAC GGTGATCAGC
CCCGACCTGA ACCGGCTGGC GCAGATGCAA CCGAACCAGA AGGCGCGTTT CGTCGCCGTC
AGCCTGGAGG AAGGTCTCGA GGCGCGTCGC CGTTACAACT GGCAAGTGCA ACGACTCCAG
CACTTCTTCC TGCGCTGA
 
Protein sequence
MSIKVLKPGL ATSVQDAGRE GHYHLGIPPS GALDQYALRA ANLLVGNAPT AAVLECALLG 
PQLEFQRDAL VAVCGARMTP RLEGAEMPLD TSFRVRAGQV LGFDFIRAGA RGYLAIDGGI
AVPEVLGSRS TYGLGAIGGL QGRRLAEGDL LPLGPASPSA VEGLALPRSL QVEVGGEVSL
RVVPGLYVHR LTPDAVERFF AETWTVGSEA DRTGYRFKGG TALRFEPREQ PFGAGSDPSN
IVDACYPIGS IQVPGGLEPI VLHRDAVSGG GYATLGTVIS PDLNRLAQMQ PNQKARFVAV
SLEEGLEARR RYNWQVQRLQ HFFLR