Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_06240 |
Symbol | |
ID | 4383846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 551016 |
End bp | 551942 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639323050 |
Product | LysR family transcriptional regulator |
Protein accession | YP_788650 |
Protein GI | 116054206 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.144211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.0778984 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCCCC TGCTGCGCCG TCTCGATCTC AACCTCCTGC TTGTCTTCGA CGCCCTGTAT CGCCACCGCA ACGTCGGCAC CGCAGCCAGC GAACTGGCGA TCAGCGCCTC GGCCTTCAGC CATGCGCTGG GGCGTCTGCG CCAGGGGCTG GACGACGAAC TGTTCCTGCG CCAGGGCAAT CGCATGCAGC CGACCCAGCG TGCCGAGCAC CTGGCCGCTG CGGTGGCCGC CGCCCTGCGC GCCCTCGGCG AGGGGCTGGA AGAGTGGCGG CCGTTCGTAC CGGGACAGAG CCAGCGTACC TTCGTCTTCG CCGCCACCGA CTACACCGCC TTCGCCCTGC TTCCGCCGCT GATGAACCGC CTGCAGCACA GCGCGCCCGG AGTGCGCCTG CGCCTGGTCA ACGCGGAACG CAAGTTGTCG GTGGAGGCCC TGGCCAGCGG GCGGATCGAT TTCGCCCTCG GCTACGACGA GGAACACGAG CGCCTGCCCG AAGGCATCCA GGCCCATGAC TGGTTCGCCG ACCGCTACGT GGTGGTAGCG CGGCGCGACC ACCCGCGCCT CGCCGGGGCG CCGACGCTGG AGGGCTACCT GGCCGAACGG CATGCGGTGG TGACGCCGTG GAACGAGGAC AGTGGGGTGA TCGACCGGCT GCTGGCCCGC TCCGGCCTGC GTCGCGAAGT GGCGGTGCAA CTGCCGACGG TGCTGGCGGC GCTGTTCCTG GCAGGCTCCA CCGATTTCCT GCTCACCGCT CCCCGACATG CCGCACAGGC ACTGGCGGAA GCCGCCGGCC TCGCCCTGTA TCCCGCGCCG TTCGACATTC CGCCCTACGT GCTGCGGCTC TACAGCCACG TCCAGCATGT CGGGCGTGAT GCCCATGCGT GGATGATCGG GCAGTTGAAG GGCCTGGATA TTTTCCGGAC GGGCTGA
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Protein sequence | MHPLLRRLDL NLLLVFDALY RHRNVGTAAS ELAISASAFS HALGRLRQGL DDELFLRQGN RMQPTQRAEH LAAAVAAALR ALGEGLEEWR PFVPGQSQRT FVFAATDYTA FALLPPLMNR LQHSAPGVRL RLVNAERKLS VEALASGRID FALGYDEEHE RLPEGIQAHD WFADRYVVVA RRDHPRLAGA PTLEGYLAER HAVVTPWNED SGVIDRLLAR SGLRREVAVQ LPTVLAALFL AGSTDFLLTA PRHAAQALAE AAGLALYPAP FDIPPYVLRL YSHVQHVGRD AHAWMIGQLK GLDIFRTG
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