| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_06230 |
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| Symbol | |
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| ID | 4383845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 548941 |
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| End bp | 550668 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639323049 |
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| Product | putative permease |
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| Protein accession | YP_788649 |
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| Protein GI | 116054205 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.037417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCA CCCCGAAGCC GCCCGCCTCG CCCCGCGAGT TTTCTCCCTC GCTGCTCGAC
CTCGGCACCC TGGAAAGCCT CGACAGCCTG CCGCGCGCCG GTCAGCGGAG CGCGGAGTTC
TCCGCCTCAC TGCTCGACCT GGGCACTCCG GCCAGTCTCG ACTGCCTGCC ACGCGCCGGG
CTGCGCGCAG CGGAGTTCTC GGCGGCGCGC CTGGACCTGG GCACTCCCGC CAGTCTCGAT
TGCCTGCCCC GCGCCAGCCA TCACGCCGGC ACCGAACTGC CGCCGCTGAG CCCGCGCCTG
TACAGCGCCG ATCTCGCCCC GACCAAGGCC GAAGGGCGCC GCTGGGGACG CTACAGCCTG
TTCGCGCTGT GGACCAACGA TGTGCACAAC ATCGCCAACT ACTCCTTCGC CATCGGCCTC
TTCGCCCTCG GCATGAGCGG TGCGCAGATC CTCGCCGCGC TGGCCCTGGG CGCGCTGATG
GTTTACGGGC TGATGAACCT GTCCGGCTAC ATGGGCCAGA AGACCGGGCT GCCCTACCCG
GTGATGTGCC GCATCGCCTT CGGCATCCAC GGCGCGCAAC TCCCCGCGCT GATCCGCGCG
GTGATCGCCA TCGCCTGGTT CGGCATCCAG ACCTATCTCG CCTCCATCGT CCTGCGCGTG
CTGCTGACGG CGATCTGGCC GGGGCTCGCA GCCTACGACC AGGACGCCAT CCTCGGGCTG
TCGAGCCTGG GCTGGGCGAC CTTCGTCGCC ATCTGGTGCG TGCAACTGCT GATCTTCGCC
TACGGCATGG AGATGGTGCG TCGCTACGAA TCCTTCGCCG GACCGGTGAT CCTGCTCACC
GTCGCCGCCC TCGCCGCCTG GATGTACCTG CGCGCCGGCG CCTCCATCGC CTGGTCAAGC
GGCGAACCCA TGAGCGGTTC GCAGATGTGG TTGAAGATCT TCGGCGGCGC GGCGTTCTGG
GTGACCCTGT ACGGCACCAT GATCCTGAAC TTCTGCGACT TCGCCCGCGG CTGCCCGGAC
CGGCGCACCA TCAGCGTCGG CAACTTCTGG GGGCTGCCGG TGAACATCCT GCTGTTCGGC
CTGTTCGCGG TGGTCCTCGC CGGCGCCCAG TTCAGGATCG ACGGCCAGCT CATCCAGAGC
CCCACCGACA TCGTCGCCGC GATCCCCGAC ACCCTCTTCC TGGTGCTGGC CAGCCTGGCG
CTGCTGATCG TCACCGTGGC GGTGAACATC ATGGCCAACT TCGTCGCCCC GGCCTACGTA
CTCACCAACC TGGCGCCGAA CCTGCTGAAC TTCCGCCGCG CCGGGCTGAT CAGCGCGACC
ATCGCAGTGC TGATCCTGCC CTGGCACCTG TACAACAGCC CCGGGGTGAT CCTCTACTTC
CTCGGCGGCC TCGGCGCGCT GCTCGGCCCG CTGTACGGGA TCATCATGGT CGACTACTAC
CTGGTGCGGA AAGGCCGGGT GAACCTGCCG GAGCTGTACA CCGAAAGCCG CGCCGGCGCC
TATCACTACG CGCGAGGGGT GAACCCGCGG GCCATCGCCG CGTTCGTCCC GGCGGCGATC
ATCTCCACCC TGCTGGCATT GTTGCCGGCA TTCGCCGAGC TATCGCCGTT CTCCTGGTTC
TTCGGCGCCG GCCTGGCCGG CCTGATCCAC TATGCCCTGG CCAAGCGCCG CACGGCCTAC
CGCGAAGTTT CCGGCGAAGC GATCGCGGTG GACAGCGTGC AGCACTGA
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| Protein sequence | MSSTPKPPAS PREFSPSLLD LGTLESLDSL PRAGQRSAEF SASLLDLGTP ASLDCLPRAG
LRAAEFSAAR LDLGTPASLD CLPRASHHAG TELPPLSPRL YSADLAPTKA EGRRWGRYSL
FALWTNDVHN IANYSFAIGL FALGMSGAQI LAALALGALM VYGLMNLSGY MGQKTGLPYP
VMCRIAFGIH GAQLPALIRA VIAIAWFGIQ TYLASIVLRV LLTAIWPGLA AYDQDAILGL
SSLGWATFVA IWCVQLLIFA YGMEMVRRYE SFAGPVILLT VAALAAWMYL RAGASIAWSS
GEPMSGSQMW LKIFGGAAFW VTLYGTMILN FCDFARGCPD RRTISVGNFW GLPVNILLFG
LFAVVLAGAQ FRIDGQLIQS PTDIVAAIPD TLFLVLASLA LLIVTVAVNI MANFVAPAYV
LTNLAPNLLN FRRAGLISAT IAVLILPWHL YNSPGVILYF LGGLGALLGP LYGIIMVDYY
LVRKGRVNLP ELYTESRAGA YHYARGVNPR AIAAFVPAAI ISTLLALLPA FAELSPFSWF
FGAGLAGLIH YALAKRRTAY REVSGEAIAV DSVQH
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