Gene PA14_06130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_06130 
Symbol 
ID4383837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp540777 
End bp541727 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content73% 
IMG OID639323041 
Producthypothetical protein 
Protein accessionYP_788641 
Protein GI116054197 
COG category[V] Defense mechanisms 
COG ID[COG4257] Streptogramin lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.772958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.00656931 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGTCACC TGCCCTACCC GCTGCTGGGC CTGCTCCTGG CCCTGTCGTC GACCGGCGCC 
GCCCTGGCCG GCGAACAGTA CTACCCGCTG GACAAGGGCT CCGCGCCCTA CGCGGTCGCG
CCCAGTGCAC AGGGTGCGGT CTGGTACGGC GCGGACGGCG GGCATTCGCT GGGGCGCCTC
GACCCGACCA GTGGCGAGAG CGTGCAGGTG CCGCTCGGCG AAGGCGCGCG GCCGCGAGCC
ATCGTCAGCG ACGAGAGCGG CAACGCCTGG GTGCTCGACA GTGGCCTCAA CGCCATCCTT
CGCATCGGCG GCGAGCGCCT GGGCAGCGAA CGTTTCCCGC TACCGGCCAA GGCCGCGCCG
GCCGGGCTCG AGTCCGCGGT ATTCGACGAC GACGGGCGCC TCTGGTTCAC CGGCAGCCGC
GGCTTCCACG GTCGCCTCGA CCCAGCCAGG CGCCTGGTGG AGGTCTGGCC CTCGCCCCAG
GGCAAGGCGG CGAACGGCAT CTGCGTCACC CCGGACGGCG AGGTCTGGTA CGCGCAGGAC
GACGCGCTGG TGCATGTCGA TCCGCTCGAC GGCAGCGCCG AGCGGTTGCC CGCGCCTGAA
GGCACGAAGG CCTTGCGCGG GATCGGCGCC GACTCCATCG GCAGGCTCTG GGCCAGCGAC
AGCGGTGGCG CCCGGCTGTA CCGCTACGAT CCCAGCGATG CCTCGTGGCA GAGCTGGCCG
CTGCCGGACA GCCAGGCCCG CCCGGACAGC CTGCGGGTCG ACGCCATGGA CCGTGTCTGG
CTGCACGACG CCGCCAGCGG GGCGCTCTTG CGTTTCGACA GTGAGCAGGC GACATTCCGC
GTCCTGCCCA GCGACCGGCC GGCGCCCGGC AACGCCCTGC TCGGCGGTCG CCCCGGAGAA
ACCTGGAGCG CCGAGCCTGC CGCCGATCGT CTGCGCGTCG TCCGCGACTG A
 
Protein sequence
MRHLPYPLLG LLLALSSTGA ALAGEQYYPL DKGSAPYAVA PSAQGAVWYG ADGGHSLGRL 
DPTSGESVQV PLGEGARPRA IVSDESGNAW VLDSGLNAIL RIGGERLGSE RFPLPAKAAP
AGLESAVFDD DGRLWFTGSR GFHGRLDPAR RLVEVWPSPQ GKAANGICVT PDGEVWYAQD
DALVHVDPLD GSAERLPAPE GTKALRGIGA DSIGRLWASD SGGARLYRYD PSDASWQSWP
LPDSQARPDS LRVDAMDRVW LHDAASGALL RFDSEQATFR VLPSDRPAPG NALLGGRPGE
TWSAEPAADR LRVVRD