Gene PA14_05910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_05910 
Symbol 
ID4383822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp523139 
End bp523870 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content68% 
IMG OID639323026 
Productputative periplasmic transport system 
Protein accessionYP_788626 
Protein GI116054182 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.760752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGAT GCGCACTCCT GCTGCTGACA TTGCTCCTCC CTTGCGCGCT GCCTGCCGCC 
AACCTGCGCC TGGTCGGCGA CTCCTGGCCG CCTTTCGTCG ATTCGCGCCT GCCTGGCAAC
GGCCTGGCGG TGGAACTGGT GACCACCGCG CTCAAGCGCG CCGGCTTCGA CTCGAGCTTC
CAGCAGGTAC CCTGGTCGCG TGCCCTGCAC GGCGTGCGCA GCGGTGACTA CGACATCGCC
CTGAGCGCCT GGTACGAGCC CGCCCGCAGC CTCTACGGGC AGTTTTCCCG CGCCTACCTG
AGCAACCGCA TTCGCCTGCT GCAACGCAAG GGGCGGGGTA TCGAGTTTTC CCGCCTGAGC
GACCTGCGTC CCTACCGCAT CGCGGTCGTG CGCGACTATG CCTACGCGCC CGAATTCGAC
CGTGACAGCC GTCTGCAGAA GGTCAACGTG ACCAGCTTCG CCAACGCCGC GCGGATGCTC
GAGGCGGGGC GGGTCGACCT GGCGGTGGAG GACGAGCTGG CGCTGGGGGT CGCCTTCAAG
GGCGAACTGG CCGATTTGCG CGACAAGCTG GAGGTACTGC CCACCCCGCT TGGCGAGAAC
GGCCTGCACC TGCTGGTGAG CCTGAGGAAT CCCCGGCATG ACGAGATCGT CGAAGGCTTC
GACCTGGCCA TCCGCGGAAT GCGCGACGAC GGCAGCTACC AGCGCCTGCT GGAGCGCTAC
GGCGCGCGCT AA
 
Protein sequence
MLRCALLLLT LLLPCALPAA NLRLVGDSWP PFVDSRLPGN GLAVELVTTA LKRAGFDSSF 
QQVPWSRALH GVRSGDYDIA LSAWYEPARS LYGQFSRAYL SNRIRLLQRK GRGIEFSRLS
DLRPYRIAVV RDYAYAPEFD RDSRLQKVNV TSFANAARML EAGRVDLAVE DELALGVAFK
GELADLRDKL EVLPTPLGEN GLHLLVSLRN PRHDEIVEGF DLAIRGMRDD GSYQRLLERY
GAR