Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_05910 |
Symbol | |
ID | 4383822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 523139 |
End bp | 523870 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639323026 |
Product | putative periplasmic transport system |
Protein accession | YP_788626 |
Protein GI | 116054182 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.760752 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGAT GCGCACTCCT GCTGCTGACA TTGCTCCTCC CTTGCGCGCT GCCTGCCGCC AACCTGCGCC TGGTCGGCGA CTCCTGGCCG CCTTTCGTCG ATTCGCGCCT GCCTGGCAAC GGCCTGGCGG TGGAACTGGT GACCACCGCG CTCAAGCGCG CCGGCTTCGA CTCGAGCTTC CAGCAGGTAC CCTGGTCGCG TGCCCTGCAC GGCGTGCGCA GCGGTGACTA CGACATCGCC CTGAGCGCCT GGTACGAGCC CGCCCGCAGC CTCTACGGGC AGTTTTCCCG CGCCTACCTG AGCAACCGCA TTCGCCTGCT GCAACGCAAG GGGCGGGGTA TCGAGTTTTC CCGCCTGAGC GACCTGCGTC CCTACCGCAT CGCGGTCGTG CGCGACTATG CCTACGCGCC CGAATTCGAC CGTGACAGCC GTCTGCAGAA GGTCAACGTG ACCAGCTTCG CCAACGCCGC GCGGATGCTC GAGGCGGGGC GGGTCGACCT GGCGGTGGAG GACGAGCTGG CGCTGGGGGT CGCCTTCAAG GGCGAACTGG CCGATTTGCG CGACAAGCTG GAGGTACTGC CCACCCCGCT TGGCGAGAAC GGCCTGCACC TGCTGGTGAG CCTGAGGAAT CCCCGGCATG ACGAGATCGT CGAAGGCTTC GACCTGGCCA TCCGCGGAAT GCGCGACGAC GGCAGCTACC AGCGCCTGCT GGAGCGCTAC GGCGCGCGCT AA
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Protein sequence | MLRCALLLLT LLLPCALPAA NLRLVGDSWP PFVDSRLPGN GLAVELVTTA LKRAGFDSSF QQVPWSRALH GVRSGDYDIA LSAWYEPARS LYGQFSRAYL SNRIRLLQRK GRGIEFSRLS DLRPYRIAVV RDYAYAPEFD RDSRLQKVNV TSFANAARML EAGRVDLAVE DELALGVAFK GELADLRDKL EVLPTPLGEN GLHLLVSLRN PRHDEIVEGF DLAIRGMRDD GSYQRLLERY GAR
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