| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_05820 |
|---|
| Symbol | |
|---|
| ID | 4383815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 514655 |
|---|
| End bp | 515878 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639323019 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_788619 |
|---|
| Protein GI | 116054175 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGGCG CCCTTTCCCA TATCCGCGTA CTCGACCTGT CCCGTGTCCT GGCCGGCCCT
TGGGCCGGGC AGATTCTCGC CGACCTCGGC GCCGAGGTGA TCAAGATCGA GCGCCCCGGC
AGCGGCGACG ACACCCGCGC CTGGGGCCCG CCGTTCCTCA AGGATGCCGA AGGCAACGAC
ACCAGCGAGG CGGCCTACTA CCTGTCGGCC AACCGCAACA AGAAGTCGGT GACGGTGGAC
TTCACCCAGC CGGAAGGCCA GCGCATCGTT CGCGAATTGG CGGCCAAGGC CGACATCCTG
CTGGAGAACT TCAAGGTCGG CGGGCTCAAG GCCTATGGCC TCGACTATGA ATCGCTGAAG
CAGGTCAACC CGAAGCTGAT CTACTGTTCG ATCACCGGCT TCGGCCAGTC CGGCCCCTAT
GCCAAGCGCG CCGGCTATGA CTTCATGATC CAGGGCCTGG GCGGCCTGAT GAGCCTCACC
GGGCGCGCCG ACAACGAGGA AGGCGCCGGT CCGGTGAAGG TCGGCGTGGC GCTGACCGAT
ATCCTCACCG GGCTGTACTC CTCCACCGCG GTGCTCGCCG CCCTCGCCCA CCGCGACGTC
AGCGGCATCG GCCAGCACAT CGACATGGCC CTGCTCGACG TGCAGGTCGC CTGCCTGGCC
AACCAGACCC TCAACTACCT GACCACCGGC GTGCCGCCGC GGCGCCTGGG CAACGCACAC
CCGAACATCG TGCCGTACCA GGACTTCCCC ACCGCCGACG GCGACATGAT CCTCACGGTC
GGCAACGACA GCCAGTTCCG CAAGTTCGCC GAGCTGGCAG ACCACCCGGA ATGGGCCGAC
GACCCGCGCT TCGCCACCAA CAAGGCGCGG GTGGCCAACC GCGAGGTGCT GATCCCGCTG
ATCCGCCAGG CCACGGTGCT GCACACCACC GCCGAGTGGA TTCTTTCCCT GGAGCGCGCC
GGCGTGCCCT GCGGGCCGAT CAACGACCTG GCGCAAGTGT TCGCCGACCC GCAGGTGCAG
GCCCGCGGCC TGCGCGTGGA GCTACCGCAC CCGCTGGCCG GGACGGTTCC GCAGGTAGCC
AGCCCGATCC GCCTGTCCGA GACGCCGGTG GAATACCGCA ACCCGCCGCC CACCCTCGGC
CAGCACACCG ACGAGGTCCT CGAGACGCTC CTCGGCCTGG ACGCGGCCGC GCTGGAAAGG
CTGCGCGACG GCAAGGTGAT CTGA
|
|---|
| Protein sequence | MPGALSHIRV LDLSRVLAGP WAGQILADLG AEVIKIERPG SGDDTRAWGP PFLKDAEGND
TSEAAYYLSA NRNKKSVTVD FTQPEGQRIV RELAAKADIL LENFKVGGLK AYGLDYESLK
QVNPKLIYCS ITGFGQSGPY AKRAGYDFMI QGLGGLMSLT GRADNEEGAG PVKVGVALTD
ILTGLYSSTA VLAALAHRDV SGIGQHIDMA LLDVQVACLA NQTLNYLTTG VPPRRLGNAH
PNIVPYQDFP TADGDMILTV GNDSQFRKFA ELADHPEWAD DPRFATNKAR VANREVLIPL
IRQATVLHTT AEWILSLERA GVPCGPINDL AQVFADPQVQ ARGLRVELPH PLAGTVPQVA
SPIRLSETPV EYRNPPPTLG QHTDEVLETL LGLDAAALER LRDGKVI
|
|---|
| |