| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_05550 |
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| Symbol | oprM |
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| ID | 4384295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 491084 |
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| End bp | 492541 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639323001 |
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| Product | major intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor |
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| Protein accession | YP_788601 |
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| Protein GI | 116054158 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.203755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGT CCTTCCTTTC CCTGGCGGTA GCCGCTGTCG TTCTGTCCGG CTGCTCGCTG
ATCCCCGACT ACCAGCGCCC CGAGGCGCCG GTAGCCGCGG CCTACCCGCA AGGGCAGGCC
TACGGGCAGA ACACCGGCGC GGCGGCCGTT CCGGCCGCCG ACATCGGCTG GCGCGAGTTC
TTCCGCGACC CGCAGTTGCA GCAACTGATC GGCGTGGCGC TGGAAAACAA CCGCGACCTG
CGGGTCGCCG CGTTGAACGT CGAGGCCTTC CGGGCGCAGT ACCGCATCCA GCGGGCCGAC
CTGTTCCCGC GGATCGGCGT GGACGGTAGC GGCACCCGCC AGCGTTTGCC GGGCGACCTG
TCGACCACCG GCAGTCCGGC GATTTCCAGC CAGTACGGGG TGACCCTGGG CACTACCGCC
TGGGAACTCG ATCTCTTCGG CCGCCTGCGC AGCCTGCGCG ACCAGGCCCT GGAGCAGTAC
CTGGCGACCG AACAGGCGCA GCGCAGCGCG CAGACCACCC TGGTGGCCAG CGTGGCGACC
GCCTACCTGA CGCTGAAGGC CGACCAGGCG CAGTTGCAAC TGACCAAGGA CACCCTGGGC
ACCTACCAGA AGAGTTTCGA CCTGACCCAG CGCAGCTACG ACGTCGGCGT CGCCTCCGCG
CTCGACCTGC GCCAGGCGCA GACCGCCGTG GAAGGCGCCC GCGCGACCCT GGCGCAGTAC
ACCCGCCTGG TAGCCCAGGA CCAGAATGCA CTGGTCCTGC TGCTGGGTTC CGGGATCCCG
GCGAACCTGC CGCAAGGCCT GGGCCTGGAC CAGACCCTGC TGACCGAAGT GCCGGCGGGC
CTGCCGTCGG ACCTGCTGCA ACGGCGCCCG GACATCCTCG AGGCCGAGCA CCAGCTCATG
GCCGCCAACG CCAGCATCGG CGCCGCGCGC GCGGCGTTCT TCCCGAGCAT CAGCCTGACC
GCCAACGCCG GCACCATGAG CCGCCAGCTG TCCGGCCTGT TCGACGCCGG TTCGGGCTCC
TGGTTGTTCC AGCCGTCGAT CAACCTGCCG ATCTTCACCG CCGGCAGCCT GCGCGCCAGC
CTGGACTACG CGAAGATCCA GAAGGACATC AACGTCGCGC AGTACGAGAA GGCGATCCAG
ACCGCCTTCC AGGAAGTCGC CGACGGTCTG GCCGCGCGCG GTACCTTCAC CGAGCAGTTG
CAGGCACAGC GCGATCTGGT CAAGGCCAGC GACGAGTACT ACCAGCTCGC CGACAAGCGC
TACCGCACGG GGGTGGACAA CTACCTGACC CTGCTCGACG CGCAACGCTC GCTGTTCACC
GCGCAGCAGC AACTGATCAC CGACCGCCTC AACCAGCTGA CCAGCGAGGT CAACCTGTAC
AAGGCCCTCG GCGGCGGCTG GAACCAGCAG ACCGTGACCC AGCAGCAGAC CGCGAAGAAG
GAAGATCCGC AGGCCTGA
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| Protein sequence | MKRSFLSLAV AAVVLSGCSL IPDYQRPEAP VAAAYPQGQA YGQNTGAAAV PAADIGWREF
FRDPQLQQLI GVALENNRDL RVAALNVEAF RAQYRIQRAD LFPRIGVDGS GTRQRLPGDL
STTGSPAISS QYGVTLGTTA WELDLFGRLR SLRDQALEQY LATEQAQRSA QTTLVASVAT
AYLTLKADQA QLQLTKDTLG TYQKSFDLTQ RSYDVGVASA LDLRQAQTAV EGARATLAQY
TRLVAQDQNA LVLLLGSGIP ANLPQGLGLD QTLLTEVPAG LPSDLLQRRP DILEAEHQLM
AANASIGAAR AAFFPSISLT ANAGTMSRQL SGLFDAGSGS WLFQPSINLP IFTAGSLRAS
LDYAKIQKDI NVAQYEKAIQ TAFQEVADGL AARGTFTEQL QAQRDLVKAS DEYYQLADKR
YRTGVDNYLT LLDAQRSLFT AQQQLITDRL NQLTSEVNLY KALGGGWNQQ TVTQQQTAKK
EDPQA
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