| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_05540 |
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| Symbol | mexB |
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| ID | 4384294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 487942 |
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| End bp | 491082 |
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| Gene Length | 3141 bp |
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| Protein Length | 1046 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639323000 |
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| Product | RND multidrug efflux transporter MexB |
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| Protein accession | YP_788600 |
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| Protein GI | 116054157 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.277681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAGT TTTTCATTGA TAGGCCCATT TTCGCGTGGG TGATCGCCTT GGTGATCATG
CTCGCGGGCG GCCTGTCGAT CCTCAGTCTG CCGGTCAACC AGTACCCGGC CATCGCCCCG
CCGGCCATCG CCGTGCAGGT GAGCTACCCG GGCGCCTCGG CCGAGACGGT GCAGGACACC
GTGGTCCAGG TGATCGAGCA GCAGATGAAC GGGATCGACA ATCTGCGCTA CATCTCCTCG
GAGAGTAACT CCGACGGCAG CATGACCATC ACCGTGACCT TCGAACAGGG CACCGACCCC
GACATCGCCC AGGTCCAGGT GCAGAACAAG CTGCAACTGG CCACCCCGCT GCTGCCGCAG
GAAGTGCAGC GCCAGGGGAT CCGGGTGACC AAGGCGGTGA AGAACTTCCT CATGGTGGTC
GGTGTGGTTT CCACCGACGG CAGCATGACC AAGGAAGACC TGTCGAACTA CATCGTTTCC
AACATCCAGG ACCCGCTCTC GCGGACCAAG GGCGTCGGTG ACTTCCAGGT GTTCGGCTCG
CAGTACTCGA TGCGCATCTG GCTCGACCCG GCCAAGCTGA ACAGCTACCA GCTGACCCCG
GGCGACGTGA GCAGCGCGAT CCAGGCGCAG AACGTGCAGA TTTCCTCCGG CCAGCTCGGC
GGCTTGCCGG CGGTCAAGGG CCAGCAGCTC AACGCCACCA TCATCGGCAA GACCCGCCTG
CAGACCGCGG AGCAATTCGA GAACATCCTG CTCAAGGTCA ATCCCGACGG TTCCCAGGTG
CGCCTGAAGG ACGTCGCCGA TGTCGGCCTG GGCGGCCAGG ACTACAGCAT CAACGCGCAG
TTCAACGGCA GCCCGGCGTC CGGTATCGCG ATCAAGCTGG CCACCGGCGC CAACGCGCTG
GATACCGCCA AGGCGATCCG CCAGACCATC GCCAACCTGG AACCGTTCAT GCCGCAGGGC
ATGAAGGTGG TCTACCCGTA CGACACCACC CCGGTGGTCT CGGCCTCGAT CCATGAGGTA
GTGAAGACCC TCGGCGAGGC GATCCTCCTC GTGTTCCTGG TGATGTACCT GTTCCTGCAG
AACTTCCGCG CCACGCTGAT CCCGACCATC GCCGTACCGG TGGTGCTGCT GGGGACCTTC
GGCGTGCTCG CCGCGTTCGG CTTCTCGATC AACACCCTGA CCATGTTCGG CATGGTGCTG
GCCATCGGCT TGCTGGTGGA CGACGCCATC GTGGTGGTGG AGAACGTCGA GCGGGTGATG
GCCGAGGAAG GCCTGTCGCC AAGGGAGGCG GCGCGCAAGT CCATGGGCCA GATCCAGGGC
GCGCTGGTCG GTATCGCCAT GGTGCTCTCG GCGGTATTCC TGCCGATGGC GTTCTTCGGC
GGCTCCACCG GGGTGATCTA CCGGCAGTTC TCCATCACCA TCGTGTCGGC CATGGCCCTC
TCGGTGATCG TGGCGCTGAT CCTCACCCCG GCGCTCTGCG CGACCATGCT CAAGCCGATC
GAGAAAGGCG ACCATGGCGA GCACAAGGGC GGCTTCTTCG GCTGGTTCAA CCGGATGTTC
CTTTCCACCA CCCACGGCTA CGAGCGGGGC GTGGCGTCGA TCCTCAAGCA TCGCGCGCCG
TACCTGCTGA TCTACGTGGT GATCGTGGCC GGGATGATCT GGATGTTCAC CCGCATTCCC
ACCGCGTTCC TCCCCGACGA GGACCAGGGC GTACTGTTCG CCCAGGTACA GACCCCGCCG
GGCTCCAGTG CCGAGCGTAC CCAGGTGGTG GTGGACTCGA TGCGCGAATA CCTGCTGGAG
AAGGAAAGCT CTTCGGTCAG CTCGGTGTTC ACCGTGACCG GCTTCAACTT CGCCGGCCGC
GGCCAGAGTT CGGGCATGGC GTTCATCATG CTCAAGCCCT GGGAAGAGCG TCCCGGTGGT
GAGAACAGCG TGTTCGAGCT GGCCAAGCGC GCGCAGATGC ACTTCTTCAG CTTCAAGGAC
GCGATGGTGT TCGCCTTCGC GCCGCCGTCG GTACTGGAAC TGGGTAACGC CACCGGCTTC
GACCTGTTCC TCCAGGACCA GGCGGGCGTC GGCCACGAGG TCCTGCTCCA GGCGCGCAAC
AAGTTCCTCA TGCTCGCCGC GCAGAACCCG GCGCTGCAAC GCGTGCGCCC CAACGGCATG
AGCGACGAAC CGCAGTACAA GCTGGAGATC GACGACGAGA AGGCCAGCGC CCTCGGCGTG
TCCCTCGCCG ACATCAACAG CACCGTGTCC ATCGCCTGGG GTTCCAGCTA CGTCAACGAC
TTCATCGACC GTGGCCGGGT CAAGCGGGTC TACCTGCAGG GCAGGCCGGA CGCGCGGATG
AACCCGGACG ACCTGAGCAA GTGGTACGTG CGCAACGACA AGGGCGAGAT GGTGCCGTTC
AACGCCTTCG CCACCGGCAA GTGGGAATAC GGTTCGCCGA AGCTGGAGCG CTACAATGGC
GTGCCGGCGA TGGAGATCCT CGGCGAGCCG GCGCCCGGCC TGAGTTCCGG TGACGCCATG
GCGGCGGTCG AGGAGATCGT CAAGCAATTG CCGAAAGGCG TTGGCTACTC CTGGACCGGC
CTGTCCTACG AGGAGCGCTT GTCCGGCTCG CAGGCGCCGG CGCTGTATGC GCTGTCGCTG
CTGGTGGTGT TCCTCTGCCT GGCGGCCCTG TACGAAAGCT GGTCGATTCC GTTCTCGGTG
ATGCTGGTGG TGCCGTTGGG CGTGATCGGC GCGCTGCTGG CGACGTCCAT GCGCGGCCTG
TCTAACGACG TGTTCTTCCA GGTGGGCCTG TTGACGACCA TCGGCCTGTC GGCGAAGAAC
GCCATTCTCA TCGTGGAGTT CGCCAAGGAG CTGCACGAGC AGGGCAAGGG CATCGTCGAG
GCGGCCATCG AGGCCTGCCG CATGCGTCTG CGGCCGATCG TGATGACCTC CCTGGCGTTC
ATCCTTGGTG TGGTTCCGCT GGCGATCTCC ACCGGCGCCG GCTCGGGCAG CCAGCATGCG
ATCGGTACCG GCGTGATCGG CGGCATGGTC ACTGCGACCG TCCTGGCGAT CTTCTGGGTA
CCGCTGTTCT ACGTGGCGGT CAGCACGCTG TTCAAGGACG AGGCGTCCAA GCAGCAAGCG
TCCGTCGAAA AGGGGCAATG A
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| Protein sequence | MSKFFIDRPI FAWVIALVIM LAGGLSILSL PVNQYPAIAP PAIAVQVSYP GASAETVQDT
VVQVIEQQMN GIDNLRYISS ESNSDGSMTI TVTFEQGTDP DIAQVQVQNK LQLATPLLPQ
EVQRQGIRVT KAVKNFLMVV GVVSTDGSMT KEDLSNYIVS NIQDPLSRTK GVGDFQVFGS
QYSMRIWLDP AKLNSYQLTP GDVSSAIQAQ NVQISSGQLG GLPAVKGQQL NATIIGKTRL
QTAEQFENIL LKVNPDGSQV RLKDVADVGL GGQDYSINAQ FNGSPASGIA IKLATGANAL
DTAKAIRQTI ANLEPFMPQG MKVVYPYDTT PVVSASIHEV VKTLGEAILL VFLVMYLFLQ
NFRATLIPTI AVPVVLLGTF GVLAAFGFSI NTLTMFGMVL AIGLLVDDAI VVVENVERVM
AEEGLSPREA ARKSMGQIQG ALVGIAMVLS AVFLPMAFFG GSTGVIYRQF SITIVSAMAL
SVIVALILTP ALCATMLKPI EKGDHGEHKG GFFGWFNRMF LSTTHGYERG VASILKHRAP
YLLIYVVIVA GMIWMFTRIP TAFLPDEDQG VLFAQVQTPP GSSAERTQVV VDSMREYLLE
KESSSVSSVF TVTGFNFAGR GQSSGMAFIM LKPWEERPGG ENSVFELAKR AQMHFFSFKD
AMVFAFAPPS VLELGNATGF DLFLQDQAGV GHEVLLQARN KFLMLAAQNP ALQRVRPNGM
SDEPQYKLEI DDEKASALGV SLADINSTVS IAWGSSYVND FIDRGRVKRV YLQGRPDARM
NPDDLSKWYV RNDKGEMVPF NAFATGKWEY GSPKLERYNG VPAMEILGEP APGLSSGDAM
AAVEEIVKQL PKGVGYSWTG LSYEERLSGS QAPALYALSL LVVFLCLAAL YESWSIPFSV
MLVVPLGVIG ALLATSMRGL SNDVFFQVGL LTTIGLSAKN AILIVEFAKE LHEQGKGIVE
AAIEACRMRL RPIVMTSLAF ILGVVPLAIS TGAGSGSQHA IGTGVIGGMV TATVLAIFWV
PLFYVAVSTL FKDEASKQQA SVEKGQ
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