Gene PA14_05450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_05450 
Symbol 
ID4383809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp480769 
End bp481491 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content71% 
IMG OID639322993 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_788593 
Protein GI116054150 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.689901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGT CCCGCTTCTT CGTCGACCAG CCCCTCGCCC TCGGCCAGCA CGACCTGCCC 
GAGACCCAGG CCCACTACAT CGGCCGCGTG CTGCGGCACG CCACGGGCGA CGCCGTGCAA
CTGTTCGACG GCAGCGGCCG GGAATACCTC GGCGAGCTGG TCGAGGTCGG CAAGAAGAAT
GTCCGCGTCG AACTCCGCGA GCAGTTCGCC GGCCAGCCCG ACTCGCCCCT GCGTATCCAC
CTGGGGCAAG GCCTGTCGCG CGGCGAGCGG ATGGACTGGG CGATCCAGAA GGCCACCGAG
CTGGGGGTGG CGGAAATCAC CCCGATCGTC AGCGAGCGTT GCGAAGTGCG CCTGAAGGAC
GAGCGCGCCG ACAAGCGCCT GCAACACTGG CGCCAGGTGG CGATCAGCGC CTGCGAGCAG
TGCGGCCGTT CGAGCCTGCC GCTGATCCAT CCGCCGCTGG CCCTGGAGGA CTGGCTGCGC
GGGCGGGACG ATGAGCTCAG GCTGGTCCTG CACCCTGTGG CCGCCCCCCT GGCCAGCCAT
GTGCCGCCGT CGCGCCTGGC CTTCCTGGTG GGTCCCAAAG GCGGCCTGAG CGATGCCGAG
GTGGAGCAGG CAAAGGCGGC CGGCTTCCAC GCCGCGCGCC TCGGCCCGCG AGTGCTGCGC
ACCGAGACCG CGCCGGTGGT AGCGTTGGCG GTGGCCCAGC AACTCTGGGG CGACTTCGCC
TGA
 
Protein sequence
MRLSRFFVDQ PLALGQHDLP ETQAHYIGRV LRHATGDAVQ LFDGSGREYL GELVEVGKKN 
VRVELREQFA GQPDSPLRIH LGQGLSRGER MDWAIQKATE LGVAEITPIV SERCEVRLKD
ERADKRLQHW RQVAISACEQ CGRSSLPLIH PPLALEDWLR GRDDELRLVL HPVAAPLASH
VPPSRLAFLV GPKGGLSDAE VEQAKAAGFH AARLGPRVLR TETAPVVALA VAQQLWGDFA