Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_05450 |
Symbol | |
ID | 4383809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 480769 |
End bp | 481491 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639322993 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_788593 |
Protein GI | 116054150 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.689901 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCCTGT CCCGCTTCTT CGTCGACCAG CCCCTCGCCC TCGGCCAGCA CGACCTGCCC GAGACCCAGG CCCACTACAT CGGCCGCGTG CTGCGGCACG CCACGGGCGA CGCCGTGCAA CTGTTCGACG GCAGCGGCCG GGAATACCTC GGCGAGCTGG TCGAGGTCGG CAAGAAGAAT GTCCGCGTCG AACTCCGCGA GCAGTTCGCC GGCCAGCCCG ACTCGCCCCT GCGTATCCAC CTGGGGCAAG GCCTGTCGCG CGGCGAGCGG ATGGACTGGG CGATCCAGAA GGCCACCGAG CTGGGGGTGG CGGAAATCAC CCCGATCGTC AGCGAGCGTT GCGAAGTGCG CCTGAAGGAC GAGCGCGCCG ACAAGCGCCT GCAACACTGG CGCCAGGTGG CGATCAGCGC CTGCGAGCAG TGCGGCCGTT CGAGCCTGCC GCTGATCCAT CCGCCGCTGG CCCTGGAGGA CTGGCTGCGC GGGCGGGACG ATGAGCTCAG GCTGGTCCTG CACCCTGTGG CCGCCCCCCT GGCCAGCCAT GTGCCGCCGT CGCGCCTGGC CTTCCTGGTG GGTCCCAAAG GCGGCCTGAG CGATGCCGAG GTGGAGCAGG CAAAGGCGGC CGGCTTCCAC GCCGCGCGCC TCGGCCCGCG AGTGCTGCGC ACCGAGACCG CGCCGGTGGT AGCGTTGGCG GTGGCCCAGC AACTCTGGGG CGACTTCGCC TGA
|
Protein sequence | MRLSRFFVDQ PLALGQHDLP ETQAHYIGRV LRHATGDAVQ LFDGSGREYL GELVEVGKKN VRVELREQFA GQPDSPLRIH LGQGLSRGER MDWAIQKATE LGVAEITPIV SERCEVRLKD ERADKRLQHW RQVAISACEQ CGRSSLPLIH PPLALEDWLR GRDDELRLVL HPVAAPLASH VPPSRLAFLV GPKGGLSDAE VEQAKAAGFH AARLGPRVLR TETAPVVALA VAQQLWGDFA
|
| |