| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_05290 |
|---|
| Symbol | |
|---|
| ID | 4383795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 461511 |
|---|
| End bp | 462080 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639322979 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_788579 |
|---|
| Protein GI | 116054136 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1678] Putative transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.535405 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGA GCAGCCCAAC CTACCTCAAG CATCATTTCC TGATCGCCAT GCCGCACATG
GCCGACCCCA ATTTCGCCCA GACCGTGACC TACCTGGTCG AACACAACGA GCAGGGCGCC
ATGGGCCTGG TGATCAACCG TCCCAGCGGC CTCAACCTGG CGGAAGTCCT CGAACAGCTC
AAGCCGGACG CCCTGCCGCC GGCGCGCTGC CAGCACATCG ACATCTACAA CGGCGGCCCG
GTGCAGACCG ACCGCGGCTT CGTCCTCCAC CCCAGCGGCC TGAGCTACCA GTCGACCCTG
GAACTGGGCG AGCTGGCGAT GTCCACCTCG CAGGACGTGC TGTTCGCCAT CGCCGCCGGC
ACCGGCCCGG AAAAGAGCCT GATCAGCCTC GGCTATGCCG GCTGGGAAGC CGGCCAGCTG
GAGGCCGAGC TGAGCGACAA CGCCTGGCTG ACCTGCCCGG CGGACCCGGC GATCCTCTTC
GACCTGCCGG CCGAGGAGCG CCTCAGCGCC GCCGCCGCGC GCCTGGGCGT CAACCTCAGC
CTGCTCACCG CCCAGGCCGG TCACGCCTGA
|
|---|
| Protein sequence | MKQSSPTYLK HHFLIAMPHM ADPNFAQTVT YLVEHNEQGA MGLVINRPSG LNLAEVLEQL
KPDALPPARC QHIDIYNGGP VQTDRGFVLH PSGLSYQSTL ELGELAMSTS QDVLFAIAAG
TGPEKSLISL GYAGWEAGQL EAELSDNAWL TCPADPAILF DLPAEERLSA AAARLGVNLS
LLTAQAGHA
|
|---|
| |