Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_05230 |
Symbol | |
ID | 4383790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 456745 |
End bp | 457929 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639322974 |
Product | cystathionine gamma-lyase |
Protein accession | YP_788574 |
Protein GI | 116054131 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGC ACGACCAGCA TCCCGACGCC CCGGCCCAGG CCTTCGCGAC CCGGGTCATC CACGCCGGGC AGGCCCCCGA TCCCTCGACC GGCGCGATCA TGCCGCCGAT CTATGCCAAC TCCACCTACA TCCAGGAAAG CCCCGGGGTA CACAAGGGGC TCGACTACGG CCGCTCGCAC AACCCGACCC GCTGGGCCCT GGAGCGCTGC GTGGCCGACC TCGAGGGCGG CGCCCAGGCC TTCGCCTTCG CCTCCGGCCT GGCGGCGATC TCCTCGGTGC TGGAGCTGCT CGACGCCGGT TCCCACATCG TTTCCGGAAA TGACCTCTAC GGCGGTACCT TCCGCCTGTT CGAGCGGGTC CGCCGGCGCA GCGCCGGGCA TCGCTTCAGC TTCGTCGACC CGACCGACCT GCAGGCCTTC GAGGCCGCGC TGACCCCGGA AACCCGCATG GTCTGGGTGG AAACCCCGAG CAACCCGCTG CTGCGCCTCA CCGACCTGCG CGCCATCGCC CAGCTCTGCC GCGCCCGCGG CATCATCAGC GTGGCCGACA ACACCTTCGC CAGCCCCTAC ATCCAGCGCC CCCTGGAACT GGGCTTCGAC GTGGTGGTGC ACTCCACCAC CAAGTACCTG AACGGCCATT CCGACGTGAT CGGCGGCATC GCCATCGTCG GCGACAACCC GGACCTGCGC GAGCGCCTGG GCTTCCTGCA GAACTCGGTG GGCGCCATCT CCGGGCCGTT CGACGCCTTC CTCACCCTGC GCGGGGTGAA GACCCTGGCG CTGCGCATGG AGCGCCATTG CAGCAACGCC CTGGCCCTGG CCCAGTGGCT GGAGCGCCAG CCGCAGGTGG CGCGGGTCTA CTACCCCGGC CTGGCTTCGC ACCCGCAGCA TGAGCTGGCG AAACGGCAGA TGCGTGGCTT CGGCGGGATG ATCTCCCTCG ACCTGCGCTG CGACCTGGCC GGCGCCCGGC GCTTCCTGGA GAACGTGCGG ATCTTCTCCC TGGCGGAGAG CCTGGGCGGG GTGGAAAGCC TGATCGAGCA TCCGGCGATC ATGACCCACG CCAGCATCCC GGCGGAAACC CGCGCCGACC TGGGCATCGG TGACTCGCTG ATCCGCCTGT CGGTGGGCGT CGAGGCGCTG GAGGACCTGC AGGCCGACCT GGCGCAGGCG CTGGCGAAGA TCTGA
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Protein sequence | MSQHDQHPDA PAQAFATRVI HAGQAPDPST GAIMPPIYAN STYIQESPGV HKGLDYGRSH NPTRWALERC VADLEGGAQA FAFASGLAAI SSVLELLDAG SHIVSGNDLY GGTFRLFERV RRRSAGHRFS FVDPTDLQAF EAALTPETRM VWVETPSNPL LRLTDLRAIA QLCRARGIIS VADNTFASPY IQRPLELGFD VVVHSTTKYL NGHSDVIGGI AIVGDNPDLR ERLGFLQNSV GAISGPFDAF LTLRGVKTLA LRMERHCSNA LALAQWLERQ PQVARVYYPG LASHPQHELA KRQMRGFGGM ISLDLRCDLA GARRFLENVR IFSLAESLGG VESLIEHPAI MTHASIPAET RADLGIGDSL IRLSVGVEAL EDLQADLAQA LAKI
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