Gene PA14_05230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_05230 
Symbol 
ID4383790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp456745 
End bp457929 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content70% 
IMG OID639322974 
Productcystathionine gamma-lyase 
Protein accessionYP_788574 
Protein GI116054131 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC ACGACCAGCA TCCCGACGCC CCGGCCCAGG CCTTCGCGAC CCGGGTCATC 
CACGCCGGGC AGGCCCCCGA TCCCTCGACC GGCGCGATCA TGCCGCCGAT CTATGCCAAC
TCCACCTACA TCCAGGAAAG CCCCGGGGTA CACAAGGGGC TCGACTACGG CCGCTCGCAC
AACCCGACCC GCTGGGCCCT GGAGCGCTGC GTGGCCGACC TCGAGGGCGG CGCCCAGGCC
TTCGCCTTCG CCTCCGGCCT GGCGGCGATC TCCTCGGTGC TGGAGCTGCT CGACGCCGGT
TCCCACATCG TTTCCGGAAA TGACCTCTAC GGCGGTACCT TCCGCCTGTT CGAGCGGGTC
CGCCGGCGCA GCGCCGGGCA TCGCTTCAGC TTCGTCGACC CGACCGACCT GCAGGCCTTC
GAGGCCGCGC TGACCCCGGA AACCCGCATG GTCTGGGTGG AAACCCCGAG CAACCCGCTG
CTGCGCCTCA CCGACCTGCG CGCCATCGCC CAGCTCTGCC GCGCCCGCGG CATCATCAGC
GTGGCCGACA ACACCTTCGC CAGCCCCTAC ATCCAGCGCC CCCTGGAACT GGGCTTCGAC
GTGGTGGTGC ACTCCACCAC CAAGTACCTG AACGGCCATT CCGACGTGAT CGGCGGCATC
GCCATCGTCG GCGACAACCC GGACCTGCGC GAGCGCCTGG GCTTCCTGCA GAACTCGGTG
GGCGCCATCT CCGGGCCGTT CGACGCCTTC CTCACCCTGC GCGGGGTGAA GACCCTGGCG
CTGCGCATGG AGCGCCATTG CAGCAACGCC CTGGCCCTGG CCCAGTGGCT GGAGCGCCAG
CCGCAGGTGG CGCGGGTCTA CTACCCCGGC CTGGCTTCGC ACCCGCAGCA TGAGCTGGCG
AAACGGCAGA TGCGTGGCTT CGGCGGGATG ATCTCCCTCG ACCTGCGCTG CGACCTGGCC
GGCGCCCGGC GCTTCCTGGA GAACGTGCGG ATCTTCTCCC TGGCGGAGAG CCTGGGCGGG
GTGGAAAGCC TGATCGAGCA TCCGGCGATC ATGACCCACG CCAGCATCCC GGCGGAAACC
CGCGCCGACC TGGGCATCGG TGACTCGCTG ATCCGCCTGT CGGTGGGCGT CGAGGCGCTG
GAGGACCTGC AGGCCGACCT GGCGCAGGCG CTGGCGAAGA TCTGA
 
Protein sequence
MSQHDQHPDA PAQAFATRVI HAGQAPDPST GAIMPPIYAN STYIQESPGV HKGLDYGRSH 
NPTRWALERC VADLEGGAQA FAFASGLAAI SSVLELLDAG SHIVSGNDLY GGTFRLFERV
RRRSAGHRFS FVDPTDLQAF EAALTPETRM VWVETPSNPL LRLTDLRAIA QLCRARGIIS
VADNTFASPY IQRPLELGFD VVVHSTTKYL NGHSDVIGGI AIVGDNPDLR ERLGFLQNSV
GAISGPFDAF LTLRGVKTLA LRMERHCSNA LALAQWLERQ PQVARVYYPG LASHPQHELA
KRQMRGFGGM ISLDLRCDLA GARRFLENVR IFSLAESLGG VESLIEHPAI MTHASIPAET
RADLGIGDSL IRLSVGVEAL EDLQADLAQA LAKI