Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_04820 |
Symbol | |
ID | 4383755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 425972 |
End bp | 426619 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639322939 |
Product | TetR family transcriptional regulator |
Protein accession | YP_788539 |
Protein GI | 116054096 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 59 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACCAC GCATCAAGAC CCGCGATCGC ATCGCCCAGG CCAGCCTGGA ACTGTTCAAC GCCCAGGGCG AGCGCAGCGT CACCACCAAC CATATCGCCA CCCACCTGGG TATATCGCCT GGGAACCTCT ACTACCACTA CCCGAACAAG CAGGCGATCA TCGCCGAGCT GTTCGCCGAG TACGAAAGCC ACGTCGAGAG TTTCCTGCGC CTGCCCGAAG GGCGGGGTCT GACGGTGGAC GACAAGACCT TCTACCTGGA AGCGCTACTG GCCGCGATGT GGCGCTACCG CTTCCTCCAC CGCGACCTCG AGCACCTGCT GGAAAGCGAC CCGGAGCTGG CGGCGCGCTA CCGCGCCTTC GCCCAGCGTT GCCTGGTCAA CGCCAAGGCG ATCTACCGGG GCTTCACCGA GGCCGGCATC CTGCGGATGA ACGAGACCCA GCTGGAGGCC CTGACCCTCA ACGCCTGGAT CATCCTCACC TCCTGGGTGC GCTTCCTCTG CACCACCCTC GATCTCGACG GCGACCTCAG CGAGGCGCAA CTGCGTCGCG GCATCTACCA GGTGCTGGCG CTGGAGAGCG GGCACATCGA GGCGCAGGCC CAGGATGCGG TGGACGGGAT TTCCGAGCGG CTCTACGTGC CGCTCTGA
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Protein sequence | MAPRIKTRDR IAQASLELFN AQGERSVTTN HIATHLGISP GNLYYHYPNK QAIIAELFAE YESHVESFLR LPEGRGLTVD DKTFYLEALL AAMWRYRFLH RDLEHLLESD PELAARYRAF AQRCLVNAKA IYRGFTEAGI LRMNETQLEA LTLNAWIILT SWVRFLCTTL DLDGDLSEAQ LRRGIYQVLA LESGHIEAQA QDAVDGISER LYVPL
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