Gene PA14_04820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_04820 
Symbol 
ID4383755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp425972 
End bp426619 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content66% 
IMG OID639322939 
ProductTetR family transcriptional regulator 
Protein accessionYP_788539 
Protein GI116054096 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCAC GCATCAAGAC CCGCGATCGC ATCGCCCAGG CCAGCCTGGA ACTGTTCAAC 
GCCCAGGGCG AGCGCAGCGT CACCACCAAC CATATCGCCA CCCACCTGGG TATATCGCCT
GGGAACCTCT ACTACCACTA CCCGAACAAG CAGGCGATCA TCGCCGAGCT GTTCGCCGAG
TACGAAAGCC ACGTCGAGAG TTTCCTGCGC CTGCCCGAAG GGCGGGGTCT GACGGTGGAC
GACAAGACCT TCTACCTGGA AGCGCTACTG GCCGCGATGT GGCGCTACCG CTTCCTCCAC
CGCGACCTCG AGCACCTGCT GGAAAGCGAC CCGGAGCTGG CGGCGCGCTA CCGCGCCTTC
GCCCAGCGTT GCCTGGTCAA CGCCAAGGCG ATCTACCGGG GCTTCACCGA GGCCGGCATC
CTGCGGATGA ACGAGACCCA GCTGGAGGCC CTGACCCTCA ACGCCTGGAT CATCCTCACC
TCCTGGGTGC GCTTCCTCTG CACCACCCTC GATCTCGACG GCGACCTCAG CGAGGCGCAA
CTGCGTCGCG GCATCTACCA GGTGCTGGCG CTGGAGAGCG GGCACATCGA GGCGCAGGCC
CAGGATGCGG TGGACGGGAT TTCCGAGCGG CTCTACGTGC CGCTCTGA
 
Protein sequence
MAPRIKTRDR IAQASLELFN AQGERSVTTN HIATHLGISP GNLYYHYPNK QAIIAELFAE 
YESHVESFLR LPEGRGLTVD DKTFYLEALL AAMWRYRFLH RDLEHLLESD PELAARYRAF
AQRCLVNAKA IYRGFTEAGI LRMNETQLEA LTLNAWIILT SWVRFLCTTL DLDGDLSEAQ
LRRGIYQVLA LESGHIEAQA QDAVDGISER LYVPL