| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_04310 |
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| Symbol | rpiA |
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| ID | 4383735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 385330 |
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| End bp | 386001 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639322900 |
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| Product | ribose-5-phosphate isomerase A |
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| Protein accession | YP_788500 |
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| Protein GI | 116054057 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0120] Ribose 5-phosphate isomerase |
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| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000000120698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCAGG ATCAGCTCAA GCAGGCAGTG GCACAGGCCG CCGTCGACCA CATTCTTCCG
CACCTCGACA GCAAGAGCAT CGTCGGCGTC GGCACAGGCT CCACCGCCAA CTTCTTCATC
GATGCCCTGG CCCGCCACAA GGCCGAGTTC GACGGCGCAG TGGCCAGTTC GGAGGCCACC
GCCAAGCGCC TGAAGGAACA TGGCATCCCG GTCTACGAGC TGAACACGGT CAGCGAGCTG
GAGTTCTACG TCGACGGCGC CGACGAAAGC AACGAGCGCC TGGAGCTGAT CAAGGGCGGC
GGTGCCGCGC TGACCCGCGA GAAGATCGTC GCCGCGGTGG CCAAGACCTT CATCTGCATC
GCCGATGCCA GCAAGCTGGT ACCCATCCTC GGCCAGTTCC CGCTGCCGGT GGAGGTCATC
CCGATGGCTC GCAGCCACGT CGCCCGCCAA CTGGTGAAGC TCGGCGGCGA TCCGGTCTAC
CGCGAAGGCG TGCTGACCGA CAACGGCAAT ATCATCCTCG ACGTGCACAA CCTGCGCATC
GACAGCCCGG TGGAACTGGA AGAGAAGATC AACGCCATCG TCGGCGTGGT CACCAACGGC
CTGTTCGCCG CCCGCCCGGC CGACCTGCTG CTGCTCGGCA CCGCCGACGG CGTCAAGACC
CTCAAGGCCT GA
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| Protein sequence | MNQDQLKQAV AQAAVDHILP HLDSKSIVGV GTGSTANFFI DALARHKAEF DGAVASSEAT
AKRLKEHGIP VYELNTVSEL EFYVDGADES NERLELIKGG GAALTREKIV AAVAKTFICI
ADASKLVPIL GQFPLPVEVI PMARSHVARQ LVKLGGDPVY REGVLTDNGN IILDVHNLRI
DSPVELEEKI NAIVGVVTNG LFAARPADLL LLGTADGVKT LKA
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