| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_04290 |
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| Symbol | |
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| ID | 4383733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 382631 |
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| End bp | 384574 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639322898 |
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| Product | hypothetical protein |
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| Protein accession | YP_788498 |
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| Protein GI | 116054055 |
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| COG category | [N] Cell motility |
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| COG ID | [COG5571] Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00560134 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCAAAC CATTAGCTGT CGCTGTAGGC CTGGGATGTG CTGCGCTGTC GTTGGGTGCC
AACGCCTATC AATACGGGGA ATACGCCGGG GAGACCCTGG AGCGCCTGAT CACCGACTAC
CCGGGCCGCT ATCGCGGCAC CGCCAGCTTC GCCGGCGCCA GCGAACTGAT GCAGTCGCGC
CTGGGCTTCG GCTACCAGAC CAGTCGCCAG GACTTCACCT GGGCCGGCAA CCGCAGTTCG
CAGAACGTCA TCGCCTCGGC GCCCGGCAGC AGCGGGAAGT TCCTGGTACT CGGCGCGCAC
TACGACACCT ACTACGGTCG CCCGACCCTG CAGGGCCTGG ACGATAACGC CTCGGGCGCG
GCGGTGCTCA CCGAGATCGC CCGCAACCTC GGCGGCATCG CCCTGGAGAA CGGCCTCGAG
GTGGTCGGTT TCGGCGCCGA GGAGGAAGGC CTGCGCGGTT CGCGTGCCTA CGTCGAGTCC
CTCGACGCCA GCCAGCGCGC CAACCTGCTG GGAATGATCA ACCTCGACAG CCTGGTCACC
GGCGACAAGA TGTACGCCCA TGCCGGCTCC AACAGCGTGT CCAACCCGGC CCTCGGCGCC
TACCGCGAAC AGATCCTGCG CATCGCCCGC GAGCTGGACA TCCCGCTGTT CACCAACCCC
GGCCTGAACG CCGAATACCC GGCGGGTACC GGCTGCTGCA GCGACGGCGA AAGCTTCAAC
GGGATGGACA TCCCGGTGTT GTTCATCGAG GCGACCAACT GGGAACTGGG CGACCTGGAC
GGCTACGAGC AGACCGACAA CCCGGCGATT CCCGGCGGCT CAACCTGGCA CGACCCGGCC
GAGGACAACA AGGAAGTACT GACCAACGCC CTCGGCCAAG AGCGCATCGA GCAACGCATG
CGCGACTTTT CCCGCCTGCT GACGCGCCTG GTGCTGGAGC TGACCAACGC CGACCTGCTG
GCCTCCACCG CCTCCGGCGG CGCCCTGGCG CGGCAGATGG AAGACCAGTT GCAGCGCCAG
CACCAGGCAC TGACCCGCCT GCACGACCGC CGCTGGCTGA CCCTGCTCGG CAGCAACCGG
CCGGTAGGCA GCTTCGACGG CGAGGTGGGC GCGGAGGGCG AGGTCTCGCC GGACAGCGGT
TTCGACATGC CTGGCGATCC GGAGTCCAGG CGCGCCGGCG TGCATCTGCT CGGCGACTAC
CGCTACAGCG AGGCCCTGAC CCTCGGCGGC AGCCTGGCCT TCCAGCGCAG CCGCGACAAG
CTGGACCATG GCGGGCGCAT CGAGGGCGAC ACCTGGCAGC TCGGCCTGTT CGGCCTGTAC
AACGACGGCG GTCCGGAATG GCTGGCCGGC GAGCTGAACC TCGGGCATAC CCGCTACGAC
AGCAAGCGTT CGGTCTACCT CCAGGCCGCC GGCGGGCCGG TGCTGCTCGA CCAGCGTCTG
TCGGGCGACA CCTCGGCCTG GTCCTGGGGC GCCCGGCTGG AAGGCGGCTA TGACTTCAGC
TTCGGCGAAC TGCGGAGCGG GCCGCTGGCC GGTCTCGACT ACATGCGCTA CCGCATCGAC
GACTTCCGCG AGGACGAGGC CCTGCGTACC GCACTCGGCT ACGAGAAGCA GGACTACGAC
TCGCTGGAGG CGAGCCTCGG CTGGCGCCTG CGCGGCGAGC TGGCGCTGGG TGCGAGAATG
CGCCTGCAAC CCTACGCCAG CCTGCGCTGG GTCCGCGAGC TGGCGGACGG ACGCCTGGAG
GACATGGACC TGACCAGCCG CGGCGACGGG CGTGTCCGGG TCGCCGACAT GGGCGGCGTG
GACAAGGATT TCGGCCGCGC CCAGCTTGGC GCGCAACTGG CGATCACCGA GCAGCTCGGG
GTCTTCGCCG AAGCCAACAG CCGCTTCGCC CACAGCGAAG GCAACCAGGC GGGCTATTCG
CTCGGGGTGA ACTGGCAGTT CTGA
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| Protein sequence | MFKPLAVAVG LGCAALSLGA NAYQYGEYAG ETLERLITDY PGRYRGTASF AGASELMQSR
LGFGYQTSRQ DFTWAGNRSS QNVIASAPGS SGKFLVLGAH YDTYYGRPTL QGLDDNASGA
AVLTEIARNL GGIALENGLE VVGFGAEEEG LRGSRAYVES LDASQRANLL GMINLDSLVT
GDKMYAHAGS NSVSNPALGA YREQILRIAR ELDIPLFTNP GLNAEYPAGT GCCSDGESFN
GMDIPVLFIE ATNWELGDLD GYEQTDNPAI PGGSTWHDPA EDNKEVLTNA LGQERIEQRM
RDFSRLLTRL VLELTNADLL ASTASGGALA RQMEDQLQRQ HQALTRLHDR RWLTLLGSNR
PVGSFDGEVG AEGEVSPDSG FDMPGDPESR RAGVHLLGDY RYSEALTLGG SLAFQRSRDK
LDHGGRIEGD TWQLGLFGLY NDGGPEWLAG ELNLGHTRYD SKRSVYLQAA GGPVLLDQRL
SGDTSAWSWG ARLEGGYDFS FGELRSGPLA GLDYMRYRID DFREDEALRT ALGYEKQDYD
SLEASLGWRL RGELALGARM RLQPYASLRW VRELADGRLE DMDLTSRGDG RVRVADMGGV
DKDFGRAQLG AQLAITEQLG VFAEANSRFA HSEGNQAGYS LGVNWQF
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