| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_04250 |
|---|
| Symbol | |
|---|
| ID | 4383731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 380250 |
|---|
| End bp | 381299 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639322896 |
|---|
| Product | putative ATP-binding component of ABC transporter |
|---|
| Protein accession | YP_788496 |
|---|
| Protein GI | 116054053 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCG CGATAGCCAT CGAGCGGATC TGCATGGAAT TCGGTACCCC CGGCCAAGGC
CTGAAGGCCC TTGACGATGT GTCCCTGGAT ATCCACGCCA ACGAATTCTT CACCCTCCTC
GGCCCTTCCG GCTGCGGCAA GACCACCCTC CTCCGCCTCA TCGCCGGTTT CGAACAACCC
AGCTCCGGCA GCATCCGCCT CTATGGCGAA CGCATGGAAG GCCTGCCGCC GTTCCGCCGC
CCGGTCAACA CGGTGTTCCA GAGTTATGCG CTGTTCCCGC ACATGAGCGT CGCCGAGAAC
ATCGGCTTCG GCCTGGAGAT GCAGGGCCGC CCGCGCAGCG AGATCGACGC CACCGTGAGC
CGCATGCTCG AGCTGGTGAA GCTGCCGGAG GTCGGCAAGC GCCGCGCCGA CCAGTTGTCC
GGTGGCCAGC AGCAACGCAT CGCCCTGGCC CGCGCGCTGG CCAGCCGGCC CAAGGTGCTG
CTGCTCGACG AGTCGCTGTC GGCGCTGGAC CTGAAGCTGC GCAAGGAAAT GCAGATCGAG
CTGAAGCGCC TGCAGCACGA GACCGGGATC ACCTTCATCT TCGTCACCCA TGACCAGGAG
GAAGCGCTGA CCATGTCCGA CCGCATCGCG GTGATGAGCA AGGGCAAGGT GCTGCAGGTC
GGCACACCCA GCGACATCTA CGAGGCGCCG CTGAACCGGG CGGTCGCCGA CTTCATCGGC
GAAACCAACT TCCTCGAGGG CCAGGCCGAC GCCGACGGCG TGCGCCTGGC GGACGGCCAG
CGGCTGGCCG CGACGACCCC GGGCAGCGGC GCGGTGACCC TGGCGATCCG CCCGGAGCGC
ACCGAACTGG CCGCCGACGG CCAGTTGGAA GGCGTGCTGG AAAACGTCGT CTATGTCGGC
ACCGATACCG TCTACCACCT GAACGTGGCC GGCCAGCCGG GCTTCCGCGT GCGCCAGCAG
AACCGCGACG GCGCACGCTG CCCGCACAGT CCGGGGGCGA AGGTGCGGGT GCGGGTTCCC
GCCGCCGCCA TCCGGGTGCT CGCCGAATGA
|
|---|
| Protein sequence | MTSAIAIERI CMEFGTPGQG LKALDDVSLD IHANEFFTLL GPSGCGKTTL LRLIAGFEQP
SSGSIRLYGE RMEGLPPFRR PVNTVFQSYA LFPHMSVAEN IGFGLEMQGR PRSEIDATVS
RMLELVKLPE VGKRRADQLS GGQQQRIALA RALASRPKVL LLDESLSALD LKLRKEMQIE
LKRLQHETGI TFIFVTHDQE EALTMSDRIA VMSKGKVLQV GTPSDIYEAP LNRAVADFIG
ETNFLEGQAD ADGVRLADGQ RLAATTPGSG AVTLAIRPER TELAADGQLE GVLENVVYVG
TDTVYHLNVA GQPGFRVRQQ NRDGARCPHS PGAKVRVRVP AAAIRVLAE
|
|---|
| |